RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ATXN7L3BQ96GX2 97 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 FUT8Q9BYC5 575 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 FAM153AQ9UHL3 310 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 PADI4Q9UM07 663 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 GPR34Q9UPC5 381 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 SATB2Q9UPW6 733 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 CASC3O15234 703 aaKnown RBP16.09■□□□□ 0.17
CD40-207ENST00000620709 RECQL5O94762 991 aaPredicted RBP16.09■□□□□ 0.17
CD40-207ENST00000620709 TNFP01375 233 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 RENBPP51606 427 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 CASP8Q14790 479 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 PRKD1Q15139 912 aaPredicted RBP16.09■□□□□ 0.17
CD40-207ENST00000620709 C4orf22Q6V702 233 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 PCGF5Q86SE9 256 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 GKN2Q86XP6 184 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 MREGQ8N565 214 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 NAT6Q93015 286 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 WDR92Q96MX6 357 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 FCRL3Q96P31 734 aaPredicted RBP16.09■□□□□ 0.17
CD40-207ENST00000620709 BBC3Q96PG8 261 aaPredicted RBP16.09■□□□□ 0.17
CD40-207ENST00000620709 CCDC3Q9BQI4 270 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 BRD8Q9H0E9 1235 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 SUDS3Q9H7L9 328 aaPredicted RBP16.09■□□□□ 0.17
CD40-207ENST00000620709 POLR1BQ9H9Y6 1135 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 PAK5Q9P286 719 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 ANAPC5Q9UJX4 755 aa16.09■□□□□ 0.17
CD40-207ENST00000620709 RP1P56715 2156 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.08■□□□□ 0.16
CD40-207ENST00000620709 CACNB4O00305 520 aaPredicted RBP16.08■□□□□ 0.16
CD40-207ENST00000620709 RPL22P35268 128 aaKnown RBP16.08■□□□□ 0.16
CD40-207ENST00000620709 PCBP4P57723 403 aaKnown RBP16.08■□□□□ 0.16
CD40-207ENST00000620709 AP1S1P61966 158 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 NSUN2Q08J23 767 aaKnown RBP eCLIP16.08■□□□□ 0.16
CD40-207ENST00000620709 GALNT2Q10471 571 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 RALGDSQ12967 914 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 MTM1Q13496 603 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 B4GALNT4Q76KP1 1039 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 LSMEM2Q8N112 164 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 ATPAF2Q8N5M1 289 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 KYQ8NBH2 561 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 ZNF248Q8NDW4 579 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 NSMCE1Q8WV22 266 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 HTR3CQ8WXA8 447 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 HDAC11Q96DB2 347 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 PDXPQ96GD0 296 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 TBATAQ96M53 351 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 ZNF578Q96N58 590 aaPredicted RBP16.08■□□□□ 0.16
CD40-207ENST00000620709 WDR70Q9NW82 654 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 PCDHGC4Q9Y5F7 938 aa16.08■□□□□ 0.16
CD40-207ENST00000620709 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.07■□□□□ 0.16
CD40-207ENST00000620709 GOLGA6CA6NDK9 693 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 GOLGA6BA6NDN3 693 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 MAP2K7O14733 419 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 STK10O94804 968 aaKnown RBP16.07■□□□□ 0.16
CD40-207ENST00000620709 GOLGA6DP0CG33 693 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 RBMS1P29558 406 aaKnown RBP16.07■□□□□ 0.16
CD40-207ENST00000620709 HSPA9P38646 679 aaKnown RBP16.07■□□□□ 0.16
CD40-207ENST00000620709 LSSP48449 732 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 CXADRP78310 365 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 AP1B1Q10567 949 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 SPIDRQ14159 915 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 MORF4L2Q15014 288 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 HIBCHQ6NVY1 386 aaPredicted RBP16.07■□□□□ 0.16
CD40-207ENST00000620709 LIPIQ6XZB0 460 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 DPPA4Q7L190 304 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 SPACA3Q8IXA5 215 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 BBS5Q8N3I7 341 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 ARL10Q8N8L6 244 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 CCNYQ8ND76 341 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 FUBP1Q96AE4 644 aaKnown RBP16.07■□□□□ 0.16
CD40-207ENST00000620709 CCDC74AQ96AQ1 378 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 ECHDC3Q96DC8 303 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 NSMCE3Q96MG7 304 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 PSKH2Q96QS6 385 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 TSPYL1Q9H0U9 437 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 MRPL40Q9NQ50 206 aaKnown RBP16.07■□□□□ 0.16
CD40-207ENST00000620709 GOLGA6AQ9NYA3 693 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 B4GALT6Q9UBX8 382 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 SHOC2Q9UQ13 582 aa16.07■□□□□ 0.16
CD40-207ENST00000620709 SMG1Q96Q15 3661 aaKnown RBP16.07■□□□□ 0.16
CD40-207ENST00000620709 SHROOM3Q8TF72 1996 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 C5orf60A6NFR6 353 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 TMEM202A6NGA9 273 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 SMAPO00193 183 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 TP73O15350 636 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 CPP00450 1065 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 GARSP41250 739 aaKnown RBP16.06■□□□□ 0.16
CD40-207ENST00000620709 MAXP61244 160 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 PPIDQ08752 370 aaKnown RBP16.06■□□□□ 0.16
CD40-207ENST00000620709 ITKQ08881 620 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 RNASEH2BQ5TBB1 312 aaKnown RBP16.06■□□□□ 0.16
CD40-207ENST00000620709 KCTD16Q68DU8 428 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 TMC3Q7Z5M5 1100 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 TAF8Q7Z7C8 310 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 OR56A4Q8NGH8 313 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 OR1E3Q8WZA6 343 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 ZNF599Q96NL3 588 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 FOXP3Q9BZS1 431 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 ACBD3Q9H3P7 528 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 PRORYQ9H606 182 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms