RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	SEMA3C	Q99985	751 aa		14.42	□□□□□ -0.1
SMTN-223	ENST00000619644	OAZ3	Q9UMX2	235 aa		14.42	□□□□□ -0.1
SMTN-223	ENST00000619644	BRCA1	P38398	1863 aa	Known RBP	14.42	□□□□□ -0.1
SMTN-223	ENST00000619644	TRIM64	A6NGJ6	449 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	CFAP99	D6REC4	459 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	AZIN1	O14977	448 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	CAPN3	P20807	821 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	OXTR	P30559	389 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	CD52	P31358	61 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	FMO4	P31512	558 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	YAP1	P46937	504 aa	Known RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	NEDD8	Q15843	81 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	FSCN1	Q16658	493 aa	Known RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	UPP1	Q16831	310 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	RABL3	Q5HYI8	236 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	KIAA0408	Q6ZU52	694 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	LARP4	Q71RC2	724 aa	Known RBP eCLIP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	PTCD2	Q8WV60	388 aa	Known RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	DPF3	Q92784	378 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	ACD	Q96AP0	544 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	CCDC68	Q9H2F9	335 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	TMEM181	Q9P2C4	612 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	CD300A	Q9UGN4	299 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	ESRRB	O95718	433 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	GOT2	P00505	430 aa	Known RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	HOXD8	P13378	290 aa	Predicted RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	FAS	P25445	335 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	LEPR	P48357	1165 aa	Known RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	POLD2	P49005	469 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	MRPS6	P82932	125 aa	Known RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	KCTD8	Q6ZWB6	473 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	ZC3H7A	Q8IWR0	971 aa	Known RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	TERB1	Q8NA31	727 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	STON2	Q8WXE9	905 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	EXOC2	Q96KP1	924 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	RPRD1A	Q96P16	312 aa	Predicted RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	PALMD	Q9NP74	551 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	SPATA7	Q9P0W8	599 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	RNF112	Q9ULX5	631 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	ERGIC3	Q9Y282	383 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	TSC22D4	Q9Y3Q8	395 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	RHOBTB1	O94844	696 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	CDK14	O94921	469 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	S1PR4	O95977	384 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	GRK4	P32298	578 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	NFATC3	Q12968	1075 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	ITGAD	Q13349	1161 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	ZIK1	Q3SY52	487 aa	Predicted RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	BRMS1L	Q5PSV4	323 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	PIK3R6	Q5UE93	754 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	CAMK1D	Q8IU85	385 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	GTF3C2	Q8WUA4	911 aa	Predicted RBP	14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	ACBD6	Q9BR61	282 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	SARDH	Q9UL12	918 aa		14.41	□□□□□ -0.1
SMTN-223	ENST00000619644	SNAP91	O60641	907 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	NOL3	O60936	208 aa	Known RBP	14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	SOAT2	O75908	522 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	EEF1D	P29692	281 aa	Known RBP	14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	CYP2C18	P33260	490 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	THPO	P40225	353 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	HERVK_113	P63132	956 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	OR4D1	Q15615	310 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	GALNT18	Q6P9A2	607 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	TMEM74	Q96NL1	305 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	CYP2S1	Q96SQ9	504 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	ERVK-6	Q9BXR3	956 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	NEU3	Q9UQ49	428 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	TANC1	Q9C0D5	1861 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644		A0A1B0GTL3	188 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	TRIM64B	A6NI03	449 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	CD3EAP	O15446	510 aa	Known RBP	14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	CACNG3	O60359	315 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	MAP4	P27816	1152 aa	Known RBP	14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	ZNF235	Q14590	738 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	RBBP7	Q16576	425 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	SLC36A3	Q495N2	470 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	KDELC1	Q6UW63	502 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	CYHR1	Q6ZMK1	362 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	SCD5	Q86SK9	330 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	PACRGL	Q8N7B6	248 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	TRUB1	Q8WWH5	349 aa	Known RBP	14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	RMDN1	Q96DB5	314 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	UBXN10	Q96LJ8	280 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	TRIM15	Q9C019	465 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	CSNK1G1	Q9HCP0	422 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	OSER1	Q9NX31	292 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	MAP10	Q9P2G4	905 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	PRG3	Q9Y2Y8	225 aa	Predicted RBP	14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	ACTL7A	Q9Y615	435 aa		14.4	□□□□□ -0.1
SMTN-223	ENST00000619644	MYADML2	A6NDP7	307 aa		14.39	□□□□□ -0.11
SMTN-223	ENST00000619644	EI24	O14681	340 aa		14.39	□□□□□ -0.11
SMTN-223	ENST00000619644	CLOCK	O15516	846 aa		14.39	□□□□□ -0.11
SMTN-223	ENST00000619644	GPX3	P22352	226 aa		14.39	□□□□□ -0.11
SMTN-223	ENST00000619644	KPNA1	P52294	538 aa	Predicted RBP	14.39	□□□□□ -0.11
SMTN-223	ENST00000619644	TBX4	P57082	545 aa		14.39	□□□□□ -0.11
SMTN-223	ENST00000619644	INTS11	Q5TA45	600 aa	Known RBP	14.39	□□□□□ -0.11
SMTN-223	ENST00000619644	MS4A4A	Q96JQ5	239 aa		14.39	□□□□□ -0.11
SMTN-223	ENST00000619644	SPON2	Q9BUD6	331 aa		14.39	□□□□□ -0.11
SMTN-223	ENST00000619644	ARMC1	Q9NVT9	282 aa		14.39	□□□□□ -0.11

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms