RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	VPS39	Q96JC1	886 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	PTPN18	Q99952	460 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	ADPGK	Q9BRR6	497 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	RPRD1B	Q9NQG5	326 aa	Known RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	PDLIM7	Q9NR12	457 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	ADPRHL2	Q9NX46	363 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	INTS6	Q9UL03	887 aa	Known RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	MKLN1	Q9UL63	735 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	PCDHB3	Q9Y5E6	796 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	RLF	Q13129	1914 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	UPK1A	O00322	258 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	INPP4B	O15327	924 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	CAPN5	O15484	640 aa	Predicted RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	HDC	P19113	662 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	EEFSEC	P57772	596 aa	Known RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	CRADD	P78560	199 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	BAAT	Q14032	418 aa	Predicted RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	PLEKHG6	Q3KR16	790 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	NOL9	Q5SY16	702 aa	Known RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	LDLRAD1	Q5T700	205 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	TMEM236	Q5W0B7	351 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	ZC3HC1	Q86WB0	502 aa	Known RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	FSTL5	Q8N475	847 aa	Predicted RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	REPS2	Q8NFH8	660 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	OR5B17	Q8NGF7	314 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	HTR3C	Q8WXA8	447 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	MAP6	Q96JE9	813 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	ACAD9	Q9H845	621 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	AS3MT	Q9HBK9	375 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	TJP2	Q9UDY2	1190 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	HES2	Q9Y543	173 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	UBIAD1	Q9Y5Z9	338 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	LAMA3	Q16787	3333 aa		10.68	□□□□□ -0.7
CPEB1-215	ENST00000617958	WDR90	Q96KV7	1748 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	E2F8	A0AVK6	867 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	HMX3	A6NHT5	357 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	CCDC154	A6NI56	674 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	B4GALT4	O60513	344 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	MATN4	O95460	622 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ST13	P50502	369 aa	Known RBP	10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ACTR2	P61160	394 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	PRPSAP1	Q14558	356 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	MFSD10	Q14728	455 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	UGCG	Q16739	394 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	TJAP1	Q5JTD0	557 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	LAYN	Q6UX15	382 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	PLD3	Q8IV08	490 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	SGCD	Q92629	289 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	LPAR1	Q92633	364 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	LGALS12	Q96DT0	336 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	FCRL3	Q96P31	734 aa	Predicted RBP	10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ALOXE3	Q9BYJ1	711 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	KAT8	Q9H7Z6	458 aa	Known RBP	10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	NTN4	Q9HB63	628 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	RNF146	Q9NTX7	359 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	FBXL12	Q9NXK8	326 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	IL20	Q9NYY1	176 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	OPTC	Q9UBM4	332 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	EGFL7	Q9UHF1	273 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ZCWPW2	A0A1B0GU75	182 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	PNMA8C	A0A1B0GUJ8	204 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	TMEM233	B4DJY2	109 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ICAM1	P05362	532 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	PGK2	P07205	417 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	JUND	P17535	347 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ATP5F1	P24539	256 aa	Predicted RBP	10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	HTR1E	P28566	365 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	RPS5	P46782	204 aa	Known RBP	10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ACOT2	P49753	483 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	CXCR4	P61073	352 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ISL1	P61371	349 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	VBP1	P61758	197 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	CD47	Q08722	323 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	STARD3	Q14849	445 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ESCO2	Q56NI9	601 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	PITRM1	Q5JRX3	1037 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	TSTD2	Q5T7W7	516 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	LAIR2	Q6ISS4	152 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	FAM122C	Q6P4D5	195 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	ZNF438	Q7Z4V0	828 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	COLGALT1	Q8NBJ5	622 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	BRI3BP	Q8WY22	251 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	MRPL57	Q9BQC6	102 aa	Known RBP	10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	CCDC32	Q9BV29	185 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	SLC7A5P2	Q9GIP4	190 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	TOR3A	Q9H497	397 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	RHOJ	Q9H4E5	214 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	CAB39L	Q9H9S4	337 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	C12orf4	Q9NQ89	552 aa		10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	GMPR2	Q9P2T1	348 aa	Known RBP	10.67	□□□□□ -0.7
CPEB1-215	ENST00000617958	hCG_2039718	K7EN88	272 aa		10.66	□□□□□ -0.7
CPEB1-215	ENST00000617958	DGAT1	O75907	488 aa		10.66	□□□□□ -0.7
CPEB1-215	ENST00000617958	MYCL	P12524	364 aa	Predicted RBP	10.66	□□□□□ -0.7
CPEB1-215	ENST00000617958	CYP2F1	P24903	491 aa		10.66	□□□□□ -0.7
CPEB1-215	ENST00000617958	MRPL19	P49406	292 aa	Known RBP	10.66	□□□□□ -0.7
CPEB1-215	ENST00000617958	GPLD1	P80108	840 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms