RNA–Protein interactions for RNA: ENST00000617346.4

RPL17-222, Transcript of ribosomal protein L17, human

TSL 5

Gene RPL17, Length 795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL17-222	ENST00000617346	AP2M1	Q96CW1	435 aa		10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	CSPG4P5	Q96PW8	444 aa		10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	ARFGAP3	Q9NP61	516 aa		10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	SARS2	Q9NP81	518 aa	Known RBP	10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	SEPT11	Q9NVA2	429 aa	Known RBP	10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	AKAP7	Q9P0M2	348 aa	Predicted RBP	10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	KLHL3	Q9UH77	587 aa		10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	LIMA1	Q9UHB6	759 aa	Known RBP	10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	RPS6KL1	Q9Y6S9	549 aa		10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	MN1	Q10571	1320 aa	Predicted RBP	10.25	□□□□□ -0.77
RPL17-222	ENST00000617346	ZNF106	Q9H2Y7	1883 aa	Known RBP	10.25	□□□□□ -0.77
RPL17-222	ENST00000617346		A0A0J9YYE9	177 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	GOLGA6C	A6NDK9	693 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	GOLGA6B	A6NDN3	693 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	LRRC10B	A6NIK2	292 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	DDX3X	O00571	662 aa	Known RBP eCLIP	10.24	□□□□□ -0.77	7e-17	■■■■■ 26.9
RPL17-222	ENST00000617346	SEMA7A	O75326	666 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	CLDN7	O95471	211 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	TRBC1	P01850	177 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	C9	P02748	559 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	MMP2	P08253	660 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	GOLGA6D	P0CG33	693 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	ATP1A3	P13637	1013 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	LEPR	P48357	1165 aa	Known RBP	10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	PPP1CA	P62136	330 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	HHEX	Q03014	270 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	MMRN1	Q13201	1228 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	C4orf17	Q53FE4	359 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	LACTB2	Q53H82	288 aa	Predicted RBP	10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	DCUN1D2	Q6PH85	259 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	NLRP8	Q86W28	1048 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	ARRDC2	Q8TBH0	407 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	PLEKHG4B	Q96PX9	1271 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	ERGIC2	Q96RQ1	377 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	SLC38A3	Q99624	504 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	BRD8	Q9H0E9	1235 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	PRDM8	Q9NQV8	689 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	GOLGA6A	Q9NYA3	693 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	CROT	Q9UKG9	612 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	TLK1	Q9UKI8	766 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	TMPRSS11E	Q9UL52	423 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	MED13	Q9UHV7	2174 aa		10.24	□□□□□ -0.77
RPL17-222	ENST00000617346	EIF3CL	B5ME19	914 aa	Known RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	NTRK1	P04629	796 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	ANKRD34C	P0C6C1	535 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	RARA	P10276	462 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	ACP5	P13686	325 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	BRAF	P15056	766 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	GNLY	P22749	145 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	CA5A	P35218	305 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	SLC19A1	P41440	591 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	RENBP	P51606	427 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	ARSE	P51690	589 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	DSC2	Q02487	901 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	SLC25A11	Q02978	314 aa	Known RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	KLRB1	Q12918	225 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	KHDC1	Q4VXA5	237 aa	Known RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	PRR30	Q53SZ7	412 aa	Predicted RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	HENMT1	Q5T8I9	393 aa	Known RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	ARMC12	Q5T9G4	340 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	ALG1L	Q6GMV1	187 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	CERS6	Q6ZMG9	384 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	RBM43	Q6ZSC3	357 aa	Known RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	ZNF765	Q7L2R6	523 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	CHST15	Q7LFX5	561 aa	Predicted RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	GALNT6	Q8NCL4	622 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	MAML1	Q92585	1016 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	BTBD6	Q96KE9	485 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	C9orf72	Q96LT7	481 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	TEFM	Q96QE5	360 aa	Known RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	EIF3C	Q99613	913 aa	Known RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	DPYSL5	Q9BPU6	564 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	PCDH18	Q9HCL0	1135 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	NT5M	Q9NPB1	228 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	CHKB	Q9Y259	395 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	CSMD2	Q7Z408	3487 aa		10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	TEP1	Q99973	2627 aa	Known RBP	10.23	□□□□□ -0.77
RPL17-222	ENST00000617346	CAPN5	O15484	640 aa	Predicted RBP	10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	DAPK3	O43293	454 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	MFSD11	O43934	449 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	CYP2A6	P11509	494 aa	Predicted RBP	10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	ZNF8	P17098	575 aa	Predicted RBP	10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	TCN2	P20062	427 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	MMP13	P45452	471 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	LRP8	Q14114	963 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	MAP7	Q14244	749 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	ERV3-1	Q14264	604 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	ZNF235	Q14590	738 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	ATP13A4	Q4VNC1	1196 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	CPZ	Q66K79	652 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	TCTN3	Q6NUS6	607 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	CEACAM20	Q6UY09	585 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	GALNT13	Q8IUC8	556 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	PSTK	Q8IV42	348 aa	Known RBP	10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	ZNF547	Q8IVP9	402 aa		10.22	□□□□□ -0.77
RPL17-222	ENST00000617346	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.22	□□□□□ -0.77	6e-10	■■■■■ 27.8

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms