RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PIP5K1BO14986 540 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 SLC22A3O75751 556 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 PAX7P23759 505 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 VAC14Q08AM6 782 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 TRAF2Q12933 501 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 RFTN1Q14699 578 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 TPGS2Q68CL5 300 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 SERPINA9Q86WD7 417 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 TRAPPC5Q8IUR0 188 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 COLGALT2Q8IYK4 626 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 C2CD4AQ8NCU7 369 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 NMD3Q96D46 503 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZNF510Q9Y2H8 683 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 DYRK1BQ9Y463 629 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 CAPN8A6NHC0 703 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 C16orf96A6NNT2 1141 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 C5orf58C9J3I9 102 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 C8AP07357 584 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 DHRS4L1P0CG22 281 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 IMPDH1P20839 514 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 PRIM2P49643 509 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 PRMT2P55345 433 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 NAA20P61599 178 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 AP1S1P61966 158 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 EPGNQ6UW88 154 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 C11orf96Q7Z7L8 435 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 TAGAPQ8N103 731 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 ABTB1Q969K4 478 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 PPP3R2Q96LZ3 170 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZIC5Q96T25 663 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 BDH2Q9BUT1 245 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 NOL11Q9H8H0 719 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 INTS10Q9NVR2 710 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 PCDH8O95206 1070 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 MAPKAPK3Q16644 382 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 STK32CQ86UX6 486 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 APLFQ8IW19 511 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 PNPLA1Q8N8W4 532 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZNF557Q8N988 423 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 LPGAT1Q92604 370 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 UNC93B1Q9H1C4 597 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 EIF2B4Q9UI10 523 aaKnown RBP13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 GNRH1P01148 92 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 CATP04040 527 aaKnown RBP13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 FYNP06241 537 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 CDH2P19022 906 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 PTGER3P43115 390 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 HSPA7P48741 367 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 TMED1Q13445 227 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 PDK3Q15120 406 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 LYPLAL1Q5VWZ2 237 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 RBM23Q86U06 439 aaKnown RBP13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 HOMEZQ8IX15 550 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 STK39Q9UEW8 545 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 A0A1W2PRU2 124 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 MATN2O00339 956 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 CLOCKO15516 846 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 DEAF1O75398 565 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 OR4F21O95013 312 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 ALPIP09923 528 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 ABRQ12979 859 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 RAB41Q5JT25 222 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 ITFG1Q8TB96 612 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 IPPKQ9H8X2 491 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 CSNK1G1Q9HCP0 422 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 NDUFA13Q9P0J0 144 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 ANAPC2Q9UJX6 822 aa13.12□□□□□ -0.31
PPP4R3B-206ENST00000616407 SLC9A3R1O14745 358 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 GABBR2O75899 941 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ESR1P03372 595 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 SLC35E2BP0CK96 405 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ACSM2AQ08AH3 577 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 XKR4Q5GH76 650 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ACSM2BQ68CK6 577 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 OSCP1Q8WVF1 389 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 GFM2Q969S9 779 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 PTCD3Q96EY7 689 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 IRAK4Q9NWZ3 460 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 INVSQ9Y283 1065 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 TBC1D3BA6NDS4 549 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ANKRD66B4E2M5 251 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 TLL1O43897 1013 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 TNFAIP8O95379 198 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 UGT1A6P19224 532 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 UGT1A1P22309 533 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 UGT1A4P22310 534 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 UGT1A3P35503 534 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 UGT1A5P35504 534 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 SPAM1P38567 509 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 FOLH1Q04609 750 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZNF621Q6ZSS3 439 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 CEP97Q8IW35 865 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 TXNDC5Q8NBS9 432 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms