RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ITFG1Q8TB96 612 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 ANKRD49Q8WVL7 239 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 MRGPRX2Q96LB1 330 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 GPR62Q9BZJ7 368 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 IPPKQ9H8X2 491 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZBTB26Q9HCK0 441 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLC22A2O15244 555 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 SH3BGRLO75368 114 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CATP04040 527 aaKnown RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 MSH3P20585 1137 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 LEPRP48357 1165 aaKnown RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 RPL38P63173 70 aaKnown RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 NRG1Q02297 640 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 BNIP2Q12982 314 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 SFT2D3Q587I9 215 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 MTX3Q5HYI7 312 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 NAPRTQ6XQN6 538 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 KBTBD2Q8IY47 623 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 FBXO30Q8TB52 745 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 FIG4Q92562 907 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 NME7Q9Y5B8 376 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 DNAJC15Q9Y5T4 150 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 USP3Q9Y6I4 520 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 SCN7AQ01118 1682 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 PTGES3LE9PB15 166 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 F8W810 466 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CDC7O00311 574 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 MAP3K13O43283 966 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 VPS4BO75351 444 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 OAZ2O95190 189 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 OTCP00480 354 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 HNRNPCP07910 306 aaKnown RBP eCLIP5.61□□□□□ -1.511e-6■■■□□ 18.5
SYNCRIP-204ENST00000616122 HOXD8P13378 290 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CORO1AP31146 461 aaKnown RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 TTKP33981 857 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 EPHB3P54753 998 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 MS4A2Q01362 244 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 FIBCD1Q8N539 461 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 PPP3R2Q96LZ3 170 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 KCTD14Q9BQ13 255 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 AKTIPQ9H8T0 292 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 COL22A1Q8NFW1 1626 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 LCHNA4D1U4 455 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 A6NHS1 94 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 INSIG1O15503 277 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 RNASEH1O60930 286 aaKnown RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 RNASEH2AO75792 299 aaKnown RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CES1P23141 567 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 DGKAP23743 735 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 GNPDA1P46926 289 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 LIPEQ05469 1076 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 NEDD8Q15843 81 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 RABL3Q5HYI8 236 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 PRSS55Q6UWB4 352 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CYP2S1Q96SQ9 504 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 PLAC1Q9HBJ0 212 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 PRDM5Q9NQX1 630 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 SPASTQ9UBP0 616 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZNF711Q9Y462 761 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 MYO1GB0I1T2 1018 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ANKRD66B4E2M5 251 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GRID2O43424 1007 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ESRRBO95718 433 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZNF682O95780 498 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SELPP16109 830 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GLDCP23378 1020 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 RING1Q06587 406 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM151BQ6UXP7 276 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ISCA2Q86U28 154 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GPR180Q86V85 440 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 KBTBD6Q86V97 674 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SPPL2CQ8IUH8 684 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 RBFAQ8N0V3 343 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 OR2T34Q8NGX1 318 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 OR2T3Q8NH03 318 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 FOPNLQ96NB1 174 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SGIP1Q9BQI5 828 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 C17orf80Q9BSJ5 609 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 C11orf84Q9BUA3 381 aaPredicted RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PNPLA3Q9NST1 481 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 EVLQ9UI08 416 aaPredicted RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 EIF2B4Q9UI10 523 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 MTMR11A4FU01 709 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 AQP12BA6NM10 295 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 CHRNA1P02708 482 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLC7A1P30825 629 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ARRB2P32121 409 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PTGER3P43115 390 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GSK3BP49841 420 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ST8SIA6P61647 398 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 C17orf99Q6UX52 265 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 RBM44Q6ZP01 1051 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 LRRC8DQ7L1W4 858 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 IFNL1Q8IU54 200 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 AQP12AQ8IXF9 295 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TRPV3Q8NET8 790 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZNF461Q8TAF7 563 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 IGSF8Q969P0 613 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TMEM159Q96B96 161 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms