RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 IGFBP4P22692 258 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 KCNQ1P51787 676 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 NIPAL4Q0D2K0 466 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 SCAPQ12770 1279 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 ITGADQ13349 1161 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 UBAP2LQ14157 1087 aaKnown RBP13.04□□□□□ -0.32
FOXN3-219ENST00000615335 PTK2BQ14289 1009 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 N4BP2L1Q5TBK1 243 aaPredicted RBP13.04□□□□□ -0.32
FOXN3-219ENST00000615335 MBLAC2Q68D91 279 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 EFHBQ8N7U6 833 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 HIPK4Q8NE63 616 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 SHKBP1Q8TBC3 707 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 OSBPL11Q9BXB4 747 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 RPF2Q9H7B2 306 aaKnown RBP13.04□□□□□ -0.32
FOXN3-219ENST00000615335 RIC8BQ9NVN3 520 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 FKBP14Q9NWM8 211 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 TMEM9Q9P0T7 183 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 OR12D3Q9UGF7 316 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 VPS51Q9UID3 782 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 RIMS3Q9UJD0 308 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 DNAJC16Q9Y2G8 782 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 MFHAS1Q9Y4C4 1052 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 SPTBN5Q9NRC6 3674 aaKnown RBP13.04□□□□□ -0.32
FOXN3-219ENST00000615335 KCNU1A8MYU2 1149 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 SOX1O00570 391 aaPredicted RBP13.04□□□□□ -0.32
FOXN3-219ENST00000615335 TPP1O14773 563 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 GMNNO75496 209 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 GLP2RO95838 553 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 IRF1P10914 325 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 GOT1P17174 413 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 ARL4AP40617 200 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 SLC1A6P48664 564 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 CRADDP78560 199 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 RING1Q06587 406 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 PDK1Q15118 436 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 TEAD2Q15562 447 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 GPR158Q5T848 1215 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 USP43Q70EL4 1123 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 CADM3Q8N126 398 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 PIWIL2Q8TC59 973 aaKnown RBP13.04□□□□□ -0.32
FOXN3-219ENST00000615335 CMTM5Q96DZ9 223 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 SLC17A6Q9P2U8 582 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 EMCNQ9ULC0 261 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 SNX10Q9Y5X0 201 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 CPQQ9Y646 472 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 NOTCH4Q99466 2003 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 TRAV19A0A0A6YYK7 116 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 ZNF839A8K0R7 811 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 FAM72CH0Y354 149 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 M0QX08 132 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 NOL3O60936 208 aaKnown RBP13.03□□□□□ -0.32
FOXN3-219ENST00000615335 GUCY1B2O75343 617 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 LYPLA1O75608 230 aaPredicted RBP13.03□□□□□ -0.32
FOXN3-219ENST00000615335 CRYZL1O95825 349 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 GSRP00390 522 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 PROCP04070 461 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 NAT2P11245 290 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 FGF3P11487 239 aaPredicted RBP13.03□□□□□ -0.32
FOXN3-219ENST00000615335 DCKP27707 260 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 HARS2P49590 506 aaKnown RBP13.03□□□□□ -0.32
FOXN3-219ENST00000615335 SESN2P58004 480 aaPredicted RBP13.03□□□□□ -0.32
FOXN3-219ENST00000615335 CDKL1Q00532 357 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 DPYSQ14117 519 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 TEDDM1Q5T9Z0 273 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 FAM72AQ5TYM5 149 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 KRT80Q6KB66 452 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 FAM72DQ6L9T8 149 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 XKR5Q6UX68 686 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 SETD3Q86TU7 594 aaPredicted RBP13.03□□□□□ -0.32
FOXN3-219ENST00000615335 FAM72BQ86X60 149 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 LRCH3Q96II8 777 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 CAAP1Q9H8G2 361 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 DCDC2Q9UHG0 476 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 MRPS23Q9Y3D9 190 aaKnown RBP13.03□□□□□ -0.32
FOXN3-219ENST00000615335 MTCH2Q9Y6C9 303 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 H3BMQ9 156 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 EEF2KO00418 725 aaKnown RBP13.03□□□□□ -0.32
FOXN3-219ENST00000615335 ZNF197O14709 1029 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 PLIN3O60664 434 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 ATE1O95260 518 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 IGLV3-27P01718 113 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 ALDOAP04075 364 aaKnown RBP13.03□□□□□ -0.32
FOXN3-219ENST00000615335 POU2F2P09086 479 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 PGAM1P18669 254 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 MGAT1P26572 445 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 CHRNEQ04844 493 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 NAB1Q13506 487 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 TMEM184AQ6ZMB5 413 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 CCDC81Q6ZN84 652 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 CARM1Q86X55 608 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 DLG3Q92796 817 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 BTN2A3PQ96KV6 586 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 ZNF778Q96MU6 729 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 COG8Q96MW5 612 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 LGMNQ99538 433 aa13.03□□□□□ -0.32
FOXN3-219ENST00000615335 SERPINI1Q99574 410 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms