RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SLC9B2Q86UD5 537 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 NLGN4XQ8N0W4 816 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 NIPA2Q8N8Q9 360 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 NLGN4YQ8NFZ3 816 aaPredicted RBP17.71■□□□□ 0.43
SMN2-213ENST00000614240 COX14Q96I36 57 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 NAP1L5Q96NT1 182 aaPredicted RBP17.71■□□□□ 0.43
SMN2-213ENST00000614240 CATSPER2Q96P56 530 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 BPIFA3Q9BQP9 254 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 VPS18Q9P253 973 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 KCNK6Q9Y257 313 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 BZW2Q9Y6E2 419 aaKnown RBP17.71■□□□□ 0.43
SMN2-213ENST00000614240 C1orf232A0A0U1RR37 186 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 EML2O95834 649 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 ACP5P13686 325 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 MAP4P27816 1152 aaKnown RBP17.7■□□□□ 0.42
SMN2-213ENST00000614240 TLE1Q04724 770 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 GALNT2Q10471 571 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 IFI16Q16666 785 aaKnown RBP17.7■□□□□ 0.42
SMN2-213ENST00000614240 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.7■□□□□ 0.42
SMN2-213ENST00000614240 IYDQ6PHW0 289 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 CEACAM20Q6UY09 585 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 KDELC2Q7Z4H8 507 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 KCTD6Q8NC69 237 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 ZNF564Q8TBZ8 553 aaPredicted RBP17.7■□□□□ 0.42
SMN2-213ENST00000614240 CCHCR1Q8TD31 782 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 HERPUD2Q9BSE4 406 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 EFHD1Q9BUP0 239 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 TDRD1Q9BXT4 1180 aaKnown RBP17.7■□□□□ 0.42
SMN2-213ENST00000614240 FAM83DQ9H4H8 585 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 PCDH9Q9HC56 1237 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 SARS2Q9NP81 518 aaKnown RBP17.7■□□□□ 0.42
SMN2-213ENST00000614240 PDP2Q9P2J9 529 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 TBC1D29Q9UFV1 150 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 KLHL3Q9UH77 587 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 SDK2Q58EX2 2172 aa17.7■□□□□ 0.42
SMN2-213ENST00000614240 A0A1B0GTH6 734 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 CYSRT1A8MQ03 144 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 NKX2-8O15522 239 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 DNAJC6O75061 913 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 CD48P09326 243 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 PRKAR1AP10644 381 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 IL4RP24394 825 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 CCNCP24863 283 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
SMN2-213ENST00000614240 MC2RQ01718 297 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 LYSMD3Q7Z3D4 306 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 BMPERQ8N8U9 685 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 MAML1Q92585 1016 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 RTP4Q96DX8 246 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 ZPBPQ9BS86 351 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.69■□□□□ 0.42
SMN2-213ENST00000614240 RMI1Q9H9A7 625 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 PKD2L2Q9NZM6 624 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 AMACRQ9UHK6 382 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 TUBD1Q9UJT1 453 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 PILRAQ9UKJ1 303 aa17.69■□□□□ 0.42
SMN2-213ENST00000614240 RPL26L1Q9UNX3 145 aaKnown RBP17.69■□□□□ 0.42
SMN2-213ENST00000614240 PRLP01236 227 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 EPHA4P54764 986 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 DPYSL3Q14195 570 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 PAFAH1B3Q15102 231 aaKnown RBP17.68■□□□□ 0.42
SMN2-213ENST00000614240 ANKRD20A8PQ5CZ79 823 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 ZFYVE27Q5T4F4 411 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 NCBP2-AS2Q69YL0 99 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 ALG1LQ6GMV1 187 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 ARHGAP22Q7Z5H3 698 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 MAP7D3Q8IWC1 876 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 RAVER1Q8IY67 606 aaKnown RBP17.68■□□□□ 0.42
SMN2-213ENST00000614240 CCNYQ8ND76 341 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 ARRDC2Q8TBH0 407 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 SLC45A3Q96JT2 553 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 FBXO8Q9NRD0 319 aa17.68■□□□□ 0.42
SMN2-213ENST00000614240 OAS3Q9Y6K5 1087 aaKnown RBP17.68■□□□□ 0.42
SMN2-213ENST00000614240 HECTD1Q9ULT8 2610 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 KIR2DS5A0A0G2JLQ3 304 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 A0A0G2JNG1 304 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 KIR2DS3K7RE56 304 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 GRID2O43424 1007 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 CYP1A2P05177 515 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 HLA-DQB2P05538 268 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 F3P13726 295 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 MX2P20592 715 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 SPINT3P49223 89 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 NIPAL4Q0D2K0 466 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 IHHQ14623 411 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 KIR2DS5Q14953 304 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 NR1I3Q14994 352 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 SKIDA1Q1XH10 827 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 ATP13A4Q4VNC1 1196 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 COLEC12Q5KU26 742 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 PHYKPLQ8IUZ5 450 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 UNC5BQ8IZJ1 945 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 AVL9Q8NBF6 648 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 LRRN4Q8WUT4 740 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 TSGA13Q96PP4 275 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 MLPHQ9BV36 600 aaPredicted RBP17.67■□□□□ 0.42
SMN2-213ENST00000614240 ADGRE3Q9BY15 652 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 TRIT1Q9H3H1 467 aaKnown RBP17.67■□□□□ 0.42
SMN2-213ENST00000614240 OSGEPL1Q9H4B0 414 aa17.67■□□□□ 0.42
SMN2-213ENST00000614240 EPB41L1Q9H4G0 881 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms