RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 DNASE2BQ8WZ79 361 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 CDKL2Q92772 493 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 VPS35Q96QK1 796 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 AGAP2Q99490 1192 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 FAM167BQ9BTA0 163 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 UGT1A7Q9HAW7 530 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 UGT1A10Q9HAW8 530 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 UGT1A8Q9HAW9 530 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 ARGLU1Q9NWB6 273 aaPredicted RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 EIF2B4Q9UI10 523 aaKnown RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 CRLS1Q9UJA2 301 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 KMT2EQ8IZD2 1858 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 TCRBV9S1A1TA0A576 114 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 GOLGA8KD6RF30 607 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 GOLGA8TH3BQL2 631 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 RIPK2O43353 540 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 ERVK-10P10266 1014 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 FOXN2P32314 431 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 IGFALSP35858 605 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 MGAT5Q09328 741 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 LYSMD4Q5XG99 296 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 TRMT10BQ6PF06 316 aaKnown RBP14.6□□□□□ -0.07
CD48-203ENST00000613788 TMEM145Q8NBT3 493 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 FBF1Q8TES7 1133 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 HNRNPLLQ8WVV9 542 aaKnown RBP14.6□□□□□ -0.07
CD48-203ENST00000613788 UBLCP1Q8WVY7 318 aaPredicted RBP14.6□□□□□ -0.07
CD48-203ENST00000613788 SCG3Q8WXD2 468 aaKnown RBP14.6□□□□□ -0.07
CD48-203ENST00000613788 GLYATL1Q969I3 302 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 TCF12Q99081 682 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 MYOCQ99972 504 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 ORAI3Q9BRQ5 295 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 FAM96AQ9H5X1 160 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 SMOXQ9NWM0 555 aa14.6□□□□□ -0.07
CD48-203ENST00000613788 MYLKQ15746 1914 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 A0A087WUV0 522 aaPredicted RBP14.59□□□□□ -0.07
CD48-203ENST00000613788 TRBV5-4A0A0C4DH59 114 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 FADS2P1A8MWK0 482 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 K7ESM1 405 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 SLC25A14O95258 325 aaPredicted RBP14.59□□□□□ -0.07
CD48-203ENST00000613788 SOD1P00441 154 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 ABHD2P08910 425 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 PMLP29590 882 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 PTGER3P43115 390 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 TTPAP49638 278 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 YPEL5P62699 121 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 RACK1P63244 317 aaKnown RBP14.59□□□□□ -0.07
CD48-203ENST00000613788 LDLRAP1Q5SW96 308 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 ARMCX6Q7L4S7 300 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 PHYKPLQ8IUZ5 450 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 UNC5BQ8IZJ1 945 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 NXPE1Q8N323 547 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 GDAP1Q8TB36 358 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 HEXDCQ8WVB3 486 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 HIC2Q96JB3 615 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 BMFQ96LC9 184 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 APOOQ9BUR5 198 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 TEX101Q9BY14 249 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 FUT8Q9BYC5 575 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 IRF2BPLQ9H1B7 796 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 MIR1-1HGQ9H1L0 117 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 WDR26Q9H7D7 661 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 AASDHPPTQ9NRN7 309 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 PHPT1Q9NRX4 125 aaPredicted RBP14.59□□□□□ -0.07
CD48-203ENST00000613788 IARS2Q9NSE4 1012 aaKnown RBP14.59□□□□□ -0.07
CD48-203ENST00000613788 NSMCE4AQ9NXX6 385 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 IL1RAPL1Q9NZN1 696 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 ZFATQ9P243 1243 aa14.59□□□□□ -0.07
CD48-203ENST00000613788 UQCRHLA0A096LP55 91 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 POM121BA6NF01 834 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 A6NNZ2 444 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 CACNB4O00305 520 aaPredicted RBP14.58□□□□□ -0.08
CD48-203ENST00000613788 INPP4BO15327 924 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 UQCRHP07919 91 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 HOXC4P09017 264 aaPredicted RBP14.58□□□□□ -0.08
CD48-203ENST00000613788 OGNP20774 298 aaKnown RBP14.58□□□□□ -0.08
CD48-203ENST00000613788 ACRV1P26436 265 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 MAOBP27338 520 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 DPP6P42658 865 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 RABIFP47224 123 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 CLDN2P57739 230 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 SLC29A2Q14542 456 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 TEDDM1Q5T9Z0 273 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 PSAPL1Q6NUJ1 521 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 KYAT3Q6YP21 454 aaKnown RBP14.58□□□□□ -0.08
CD48-203ENST00000613788 GCNT7Q6ZNI0 430 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 PRR23BQ6ZRT6 265 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 KIAA0408Q6ZU52 694 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 ABI3BPQ7Z7G0 1075 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 SERPINA9Q86WD7 417 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 HEATR4Q86WZ0 1026 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 CNTN4Q8IWV2 1026 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 PIANPQ8IYJ0 282 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 PELI3Q8N2H9 469 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 MREGQ8N565 214 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 MFSD2AQ8NA29 543 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 SKA1Q96BD8 255 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 CYTH2Q99418 400 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 MARCH4Q9P2E8 410 aaPredicted RBP14.58□□□□□ -0.08
CD48-203ENST00000613788 RABGEF1Q9UJ41 708 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 CNOT6Q9ULM6 557 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms