RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SGF29Q96ES7 293 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 GATA5Q9BWX5 397 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-208ENST00000613073 PRKD2Q9BZL6 878 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 POLR1EQ9GZS1 481 aaKnown RBP16.44■□□□□ 0.22
CNOT3-208ENST00000613073 TMEM98Q9Y2Y6 226 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 PRAMEF11O60813 436 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 CHRNGP07510 517 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 HADHAP40939 763 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 MAPKAPK2P49137 400 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 IKBKEQ14164 716 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 HECTD3Q5T447 861 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 HDAC10Q969S8 669 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 WBP2Q969T9 261 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 RNF38Q9H0F5 515 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 STN1Q9H668 368 aaKnown RBP16.43■□□□□ 0.22
CNOT3-208ENST00000613073 SMPD4Q9NXE4 827 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 ADA2Q9NZK5 511 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 TMED5Q9Y3A6 229 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 C2orf78A6NCI8 922 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 HMGA1P17096 107 aaKnown RBP16.43■□□□□ 0.22
CNOT3-208ENST00000613073 SLC11A2P49281 568 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 CSRP3P50461 194 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 SLC12A2P55011 1212 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 YBEYP58557 167 aaPredicted RBP16.43■□□□□ 0.22
CNOT3-208ENST00000613073 GNA12Q03113 381 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 NXNQ6DKJ4 435 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 C16orf89Q6UX73 402 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 C16orf59Q7L2K0 433 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 NPAS2Q99743 824 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 SEZ6LQ9BYH1 1024 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 WDR41Q9HAD4 459 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 TCF7L2Q9NQB0 619 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 OXSMQ9NWU1 459 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 COMMD8Q9NX08 183 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 XPR1Q9UBH6 696 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 OGDHLQ9ULD0 1010 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 ATP11BQ9Y2G3 1177 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 CORINQ9Y5Q5 1042 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 ATXN1LP0C7T5 689 aaKnown RBP16.43■□□□□ 0.22
CNOT3-208ENST00000613073 ME2P23368 584 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 CORO1AP31146 461 aaKnown RBP16.43■□□□□ 0.22
CNOT3-208ENST00000613073 NAGLUP54802 743 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 CYP2R1Q6VVX0 501 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 SETD3Q86TU7 594 aaPredicted RBP16.43■□□□□ 0.22
CNOT3-208ENST00000613073 PPWD1Q96BP3 646 aaKnown RBP16.43■□□□□ 0.22
CNOT3-208ENST00000613073 ANKRD6Q9Y2G4 727 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 PCDHB12Q9Y5F1 795 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 ARL5AQ9Y689 179 aa16.43■□□□□ 0.22
CNOT3-208ENST00000613073 MICAL3Q7RTP6 2002 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 GNAO1P09471 354 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 GRIA4P48058 902 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 ITGADQ13349 1161 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 ART3Q13508 389 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 ZNF829Q3KNS6 432 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-208ENST00000613073 AARS2Q5JTZ9 985 aaKnown RBP16.42■□□□□ 0.22
CNOT3-208ENST00000613073 LRRC8EQ6NSJ5 796 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 TMEM26Q6ZUK4 368 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 CARM1Q86X55 608 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 ZNF461Q8TAF7 563 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 TBC1D15Q8TC07 691 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 FATE1Q969F0 183 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 PNPLA3Q9NST1 481 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 HOXD9P28356 352 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-208ENST00000613073 NR1D2Q14995 579 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 ANKRD33Q7Z3H0 272 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 PCDH20Q8N6Y1 951 aaKnown RBP16.42■□□□□ 0.22
CNOT3-208ENST00000613073 SREK1Q8WXA9 508 aaKnown RBP16.42■□□□□ 0.22
CNOT3-208ENST00000613073 CYP2S1Q96SQ9 504 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 OLFM1Q99784 485 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 CLK4Q9HAZ1 481 aaKnown RBP16.42■□□□□ 0.22
CNOT3-208ENST00000613073 PDFQ9HBH1 243 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 SACM1LQ9NTJ5 587 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 TRPM5Q9NZQ8 1165 aa16.42■□□□□ 0.22
CNOT3-208ENST00000613073 KIAA1522Q9P206 1035 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-208ENST00000613073 AFF4Q9UHB7 1163 aaKnown RBP16.42■□□□□ 0.22
CNOT3-208ENST00000613073 PRPF19Q9UMS4 504 aaKnown RBP16.42■□□□□ 0.22
CNOT3-208ENST00000613073 PDE4DIPQ5VU43 2346 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 STC2O76061 302 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 CLIC3O95833 236 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 MYL4P12829 197 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 MPSTP25325 297 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 CSHL1Q14406 222 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 ZYG11AQ6WRX3 759 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 TBATAQ96M53 351 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 NOL11Q9H8H0 719 aaKnown RBP16.41■□□□□ 0.22
CNOT3-208ENST00000613073 MARCH4Q9P2E8 410 aaPredicted RBP16.41■□□□□ 0.22
CNOT3-208ENST00000613073 MTF2Q9Y483 593 aaPredicted RBP16.41■□□□□ 0.22
CNOT3-208ENST00000613073 BACE2Q9Y5Z0 518 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 LOC285095A0A1B0GVY8 99 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.41■□□□□ 0.22
CNOT3-208ENST00000613073 EFEMP2O95967 443 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 RGRP47804 291 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 ACADVLP49748 655 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 BMXP51813 675 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 TXNL4AP83876 142 aaKnown RBP16.41■□□□□ 0.22
CNOT3-208ENST00000613073 CREB5Q02930 508 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 EPGNQ6UW88 154 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 TDRD5Q8NAT2 981 aaKnown RBP16.41■□□□□ 0.22
CNOT3-208ENST00000613073 HEXDCQ8WVB3 486 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 GPR78Q96P69 363 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms