RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ARL5AQ9Y689 179 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 GRID2O43424 1007 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 RPL38P63173 70 aaKnown RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 MAPKAPK3Q16644 382 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 AP5B1Q2VPB7 878 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 SYTL3Q4VX76 610 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 FBXO22Q8NEZ5 403 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 TNIP2Q8NFZ5 429 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 MCOLN3Q8TDD5 553 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 C2orf15Q8WU43 125 aaKnown RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 ANKRD49Q8WVL7 239 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 FAM162AQ96A26 154 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 EMILIN2Q9BXX0 1053 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 DDX18Q9NVP1 670 aaKnown RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 LCHNA4D1U4 455 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 A8MX80 341 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 SNAP91O60641 907 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 NIPSNAP2O75323 286 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 CDK14O94921 469 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 OR4F21O95013 312 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 PRAMEF1O95521 474 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 CAPN1P07384 714 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ALOX15P16050 662 aaPredicted RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 MSH3P20585 1137 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ATP6V1B2P21281 511 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 DNAJB13P59910 316 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 IRF8Q02556 426 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ADGRE1Q14246 886 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 RTP2Q5QGT7 225 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 FAM151BQ6UXP7 276 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 OR2T34Q8NGX1 318 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 OR2T3Q8NH03 318 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 CANT1Q8WVQ1 401 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 NRG4Q8WWG1 115 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 KCNJ9Q92806 393 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 KIAA1191Q96A73 305 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 DTNBP1Q96EV8 351 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 PPM1MQ96MI6 270 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 AARSD1Q9BTE6 412 aaKnown RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 IPPKQ9H8X2 491 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 MRM3Q9HC36 420 aaKnown RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 PNPLA3Q9NST1 481 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 TREX1Q9NSU2 369 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 INTS10Q9NVR2 710 aaKnown RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 DNAJC15Q9Y5T4 150 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 SLC38A8A6NNN8 435 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 CDC7O00311 574 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 TBL1XO60907 577 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ADAMTS4O75173 837 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 STK16O75716 305 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 MAPK1P28482 360 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 HALP42357 657 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 DIO3P55073 304 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 USP46P62068 366 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ACSM2AQ08AH3 577 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 FAM98BQ52LJ0 330 aaKnown RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 ACSM2BQ68CK6 577 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 FIG4Q92562 907 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ABTB1Q969K4 478 aaPredicted RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 AKTIPQ9H8T0 292 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 A0A0D9SEW6 157 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 AQP12BA6NM10 295 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ESRRBO95718 433 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 CKBP12277 381 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 CDH2P19022 906 aaPredicted RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 CPOXP36551 454 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ST8SIA6P61647 398 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 SLC5A9Q2M3M2 681 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 DEFB115Q30KQ5 88 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 SFT2D3Q587I9 215 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 GPR141Q7Z602 305 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ISCA2Q86U28 154 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 CNTN4Q8IWV2 1026 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 AQP12AQ8IXF9 295 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 CLDN19Q8N6F1 224 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 TTC9BQ8N6N2 239 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ITFG1Q8TB96 612 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 MYO19Q96H55 970 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 FOPNLQ96NB1 174 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 RTP3Q9BQQ7 232 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ATP13A3Q9H7F0 1226 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ZNHIT2Q9UHR6 403 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 EVLQ9UI08 416 aaPredicted RBP6.34□□□□□ -1.39
SNX13-213ENST00000611725 TRIM17Q9Y577 477 aa6.34□□□□□ -1.39
SNX13-213ENST00000611725 ANKRD66B4E2M5 251 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 HHLA1C9JL84 531 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 KERAO60938 352 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 JUNP05412 331 aaKnown RBP6.34□□□□□ -1.4
SNX13-213ENST00000611725 KCNA5P22460 613 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 ARRB2P32121 409 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 ARCN1P48444 511 aaKnown RBP6.34□□□□□ -1.4
SNX13-213ENST00000611725 LIPEQ05469 1076 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 RFTN1Q14699 578 aaPredicted RBP6.34□□□□□ -1.4
SNX13-213ENST00000611725 KBTBD6Q86V97 674 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 KBTBD2Q8IY47 623 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 OR2T12Q8NG77 320 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 MAGEE2Q8TD90 523 aaPredicted RBP6.34□□□□□ -1.4
SNX13-213ENST00000611725 SELENOMQ8WWX9 145 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 VPS33AQ96AX1 596 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms