RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 LYSMD3Q7Z3D4 306 aa17.22■□□□□ 0.35
PRKN-208ENST00000610470 TMPRSS9Q7Z410 1059 aa17.22■□□□□ 0.35
PRKN-208ENST00000610470 SNRNP27Q8WVK2 155 aaKnown RBP17.22■□□□□ 0.35
PRKN-208ENST00000610470 TRIB3Q96RU7 358 aa17.22■□□□□ 0.35
PRKN-208ENST00000610470 TRIM5Q9C035 493 aa17.22■□□□□ 0.35
PRKN-208ENST00000610470 SEMA6CQ9H3T2 930 aa17.22■□□□□ 0.35
PRKN-208ENST00000610470 RDH14Q9HBH5 336 aa17.22■□□□□ 0.35
PRKN-208ENST00000610470 RAD18Q9NS91 495 aa17.22■□□□□ 0.35
PRKN-208ENST00000610470 ACSL6Q9UKU0 697 aa17.22■□□□□ 0.35
PRKN-208ENST00000610470 FADS2P1A8MWK0 482 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 PPM1DO15297 605 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 DNAJC6O75061 913 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 ATP1A1P05023 1023 aaKnown RBP17.21■□□□□ 0.35
PRKN-208ENST00000610470 CDKN2BP42772 138 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 HADHBP55084 474 aaKnown RBP17.21■□□□□ 0.35
PRKN-208ENST00000610470 CDK18Q07002 472 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 PCSK7Q16549 785 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 TEX44Q53QW1 395 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 CCDC70Q6NSX1 233 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 USP53Q70EK8 1073 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 KDELC2Q7Z4H8 507 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 SRPK1Q96SB4 655 aaKnown RBP17.21■□□□□ 0.35
PRKN-208ENST00000610470 DPYSL5Q9BPU6 564 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 NUDT22Q9BRQ3 303 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 GLOD4Q9HC38 313 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 MAGEE1Q9HCI5 957 aa17.21■□□□□ 0.35
PRKN-208ENST00000610470 OAS3Q9Y6K5 1087 aaKnown RBP17.21■□□□□ 0.35
PRKN-208ENST00000610470 A0A0A6YYK5 440 aaPredicted RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 K7ENP7 123 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 HGSO14964 777 aaPredicted RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 CST8O60676 142 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 ITIH1P19827 911 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 CD1CP29017 333 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 FASLGP48023 281 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 MAPK10P53779 464 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 DCDC1P59894 354 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 GPLD1P80108 840 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 C19orf57Q0VDD7 668 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 TRA2AQ13595 282 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRKN-208ENST00000610470 PRKD1Q15139 912 aaPredicted RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 TAZQ16635 292 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 TAF1BQ53T94 588 aaPredicted RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 ZNF569Q5MCW4 686 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 INO80CQ6PI98 192 aaPredicted RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 SPOCD1Q6ZMY3 1216 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 CCDC81Q6ZN84 652 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 CHST15Q7LFX5 561 aaPredicted RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 TC2NQ8N9U0 490 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 TFB1MQ8WVM0 346 aaKnown RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 TADA1Q96BN2 335 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 WBP1Q96G27 269 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 CCNL2Q96S94 520 aaPredicted RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 ZSCAN5AQ9BUG6 496 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 SPATA16Q9BXB7 569 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 GPR63Q9BZJ6 419 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 CARD9Q9H257 536 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 STN1Q9H668 368 aaKnown RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 LUC7LQ9NQ29 371 aaKnown RBP17.2■□□□□ 0.34
PRKN-208ENST00000610470 WDR70Q9NW82 654 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 KCNK4Q9NYG8 393 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 SHOC2Q9UQ13 582 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 ZNF711Q9Y462 761 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 ALG6Q9Y672 507 aa17.2■□□□□ 0.34
PRKN-208ENST00000610470 IGHV1OR21-1A0A087WYE8 117 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 AGRPO00253 132 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 MTSS1O43312 755 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 LCA5LO95447 670 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 NDST3O95803 873 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 LIPCP11150 499 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 SLC2A4P14672 509 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 PTPN3P26045 913 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 LIMK2P53671 638 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 SQSTM1Q13501 440 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 C16orf72Q14CZ0 275 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 SPA17Q15506 151 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 FAM182AQ5T1J6 154 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 TMEM164Q5U3C3 297 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 ALS2CLQ60I27 953 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 KAZNQ674X7 775 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 PDPK2PQ6A1A2 396 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 ZNF574Q6ZN55 896 aaPredicted RBP17.19■□□□□ 0.34
PRKN-208ENST00000610470 B4GALNT4Q76KP1 1039 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 TMC3Q7Z5M5 1100 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 CCDC170Q8IYT3 715 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 SFRP1Q8N474 314 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 TRAM1L1Q8N609 369 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 OR4D9Q8NGE8 314 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 SPATA22Q8NHS9 363 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 SLC37A2Q8TED4 501 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 USP7Q93009 1102 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 EID2BQ96D98 161 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 CCDC74BQ96LY2 380 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 TEKT5Q96M29 485 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 SLC38A3Q99624 504 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 B3GNT4Q9C0J1 378 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 NFKBIL1Q9UBC1 381 aaPredicted RBP17.19■□□□□ 0.34
PRKN-208ENST00000610470 PRKAB1Q9Y478 270 aa17.19■□□□□ 0.34
PRKN-208ENST00000610470 MGAQ8IWI9 3026 aa17.18■□□□□ 0.34
PRKN-208ENST00000610470 FASNP49327 2511 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms