RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 HENMT1Q5T8I9 393 aaKnown RBP7.56□□□□□ -1.2
CUX1-219ENST00000606749 TMEM164Q5U3C3 297 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 TMEM71Q6P5X7 295 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 IYDQ6PHW0 289 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 GALNT13Q8IUC8 556 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 SFRP1Q8N474 314 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 PLD5Q8N7P1 536 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 EXD3Q8N9H8 876 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 CCHCR1Q8TD31 782 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 EID2BQ96D98 161 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 CCDC74BQ96LY2 380 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 TAAR9Q96RI9 348 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 DNAJC7Q99615 494 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 CHP1Q99653 195 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 DPYSL5Q9BPU6 564 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 MAK16Q9BXY0 300 aaKnown RBP7.56□□□□□ -1.2
CUX1-219ENST00000606749 ADGRE3Q9BY15 652 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 FAM83DQ9H4H8 585 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 KCNK4Q9NYG8 393 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 TMEM9Q9P0T7 183 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 VPS18Q9P253 973 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 PDP2Q9P2J9 529 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 PRKAB1Q9Y478 270 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 PCDHB11Q9Y5F2 797 aa7.56□□□□□ -1.2
CUX1-219ENST00000606749 OAS3Q9Y6K5 1087 aaKnown RBP7.56□□□□□ -1.2
CUX1-219ENST00000606749 LRRD1A4D1F6 860 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 FADS2P1A8MWK0 482 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 AKR1B10O60218 316 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 TPM3P06753 285 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 THRAP10827 490 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 WT1P19544 449 aaPredicted RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 CSF2RBP32927 897 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 GPLD1P80108 840 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 IFI35P80217 286 aaPredicted RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 ZBTB17Q13105 803 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 PDK1Q15118 436 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 SLC9A4Q6AI14 798 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 XKR5Q6UX68 686 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 CHST15Q7LFX5 561 aaPredicted RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 LYSMD3Q7Z3D4 306 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 KDELC2Q7Z4H8 507 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 TMC3Q7Z5M5 1100 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 NT5DC3Q86UY8 548 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 VASH2Q86V25 355 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 VSIG1Q86XK7 387 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 ZNF761Q86XN6 746 aaPredicted RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 ZSCAN1Q8NBB4 408 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 AGBL5Q8NDL9 886 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 SLC37A2Q8TED4 501 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 TADA1Q96BN2 335 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 IMP4Q96G21 291 aaKnown RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 AHCYL2Q96HN2 611 aaKnown RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 ZNF830Q96NB3 372 aaPredicted RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 TRIB3Q96RU7 358 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 SLC38A3Q99624 504 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 DEF6Q9H4E7 631 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 RMI1Q9H9A7 625 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 ZNHIT6Q9NWK9 470 aaKnown RBP7.55□□□□□ -1.2
CUX1-219ENST00000606749 OCIAD1Q9NX40 245 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 PKD2L2Q9NZM6 624 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 TBC1D29Q9UFV1 150 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 KCNK6Q9Y257 313 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 PCDHGA3Q9Y5H0 932 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 HEY1Q9Y5J3 304 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 B3GALT1Q9Y5Z6 326 aa7.55□□□□□ -1.2
CUX1-219ENST00000606749 A6NCN8 305 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 EFCAB7A8K855 629 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 A8MU76 341 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 STMND1H3BQB6 276 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 J3QKU1 62 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 APOL1O14791 398 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 GRID2O43424 1007 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 CBFA2T2O43439 604 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 NUAK1O60285 661 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 MTA2O94776 668 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 SLC25A14O95258 325 aaPredicted RBP7.54□□□□□ -1.2
CUX1-219ENST00000606749 ITGB2P05107 769 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 ZFXP17010 805 aaPredicted RBP7.54□□□□□ -1.2
CUX1-219ENST00000606749 ZNF8P17098 575 aaPredicted RBP7.54□□□□□ -1.2
CUX1-219ENST00000606749 CSTF2P33240 577 aaKnown RBP eCLIP7.54□□□□□ -1.2
CUX1-219ENST00000606749 HHEXQ03014 270 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 AP1B1Q10567 949 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 NFATC2Q13469 925 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 TRIM14Q14142 442 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 GALNT3Q14435 633 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 ZNF648Q5T619 568 aaPredicted RBP7.54□□□□□ -1.2
CUX1-219ENST00000606749 LRRC38Q5VT99 294 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 WDR74Q6RFH5 385 aaPredicted RBP7.54□□□□□ -1.2
CUX1-219ENST00000606749 NPNTQ6UXI9 565 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 B4GALNT4Q76KP1 1039 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 SLC9B2Q86UD5 537 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 RHOT2Q8IXI1 618 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 GPR26Q8NDV2 337 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 OR10G6Q8NH81 332 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.54□□□□□ -1.2
CUX1-219ENST00000606749 JPH3Q8WXH2 748 aaPredicted RBP7.54□□□□□ -1.2
CUX1-219ENST00000606749 EXTL1Q92935 676 aa7.54□□□□□ -1.2
CUX1-219ENST00000606749 ART4Q93070 314 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms