RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PCYT1BQ9Y5K3 369 aaPredicted RBP13.06□□□□□ -0.32
RPS28-204ENST00000602140 OAS3Q9Y6K5 1087 aaKnown RBP13.06□□□□□ -0.32
RPS28-204ENST00000602140 C1orf232A0A0U1RR37 186 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 DNAJC6O75061 913 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 PROSCO94903 275 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 WISP1O95388 367 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 ITGB6P18564 788 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 UGT1A3P35503 534 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 TAS2R40P59535 323 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 RPL26P61254 145 aaKnown RBP13.05□□□□□ -0.32
RPS28-204ENST00000602140 NFKB2Q00653 900 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 KCNC4Q03721 635 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 GBE1Q04446 702 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 SLC10A2Q12908 348 aaPredicted RBP13.05□□□□□ -0.32
RPS28-204ENST00000602140 PDK2Q15119 407 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.05□□□□□ -0.32
RPS28-204ENST00000602140 FAM129CQ86XR2 697 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 MAP7D3Q8IWC1 876 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 IL22RA1Q8N6P7 574 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 CCNYQ8ND76 341 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 OR10G6Q8NH81 332 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 WDR24Q96S15 920 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 LYSMD1Q96S90 227 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 DDA1Q9BW61 102 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 VPS18Q9P253 973 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 CTTNBP2NLQ9P2B4 639 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 TBC1D29Q9UFV1 150 aa13.05□□□□□ -0.32
RPS28-204ENST00000602140 CNOT6Q9ULM6 557 aaKnown RBP13.05□□□□□ -0.32
RPS28-204ENST00000602140 RPL26L1Q9UNX3 145 aaKnown RBP13.05□□□□□ -0.32
RPS28-204ENST00000602140 LUC7L2Q9Y383 392 aaKnown RBP13.05□□□□□ -0.32
RPS28-204ENST00000602140 SDK2Q58EX2 2172 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 EFCAB7A8K855 629 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 A8MU76 341 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 FADS2P1A8MWK0 482 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 DUX1O43812 170 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 GYPCP04921 128 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 SFTPCP11686 197 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 MX2P20592 715 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 CD86P42081 329 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 SPINT3P49223 89 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 HHEXQ03014 270 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 NFATC2Q13469 925 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 CLCA4Q14CN2 919 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 QPCTQ16769 361 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 SNAP47Q5SQN1 464 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 ZFYVE27Q5T4F4 411 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 DCAF12Q5T6F0 453 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 HENMT1Q5T8I9 393 aaKnown RBP13.04□□□□□ -0.32
RPS28-204ENST00000602140 RAVER1Q8IY67 606 aaKnown RBP13.04□□□□□ -0.32
RPS28-204ENST00000602140 CCDC13Q8IYE1 715 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 CACNA2D3Q8IZS8 1091 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 PQLC3Q8N755 202 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 FAF2Q96CS3 445 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 HDAC11Q96DB2 347 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 IQCDQ96DY2 449 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 MLPHQ9BV36 600 aaPredicted RBP13.04□□□□□ -0.32
RPS28-204ENST00000602140 SLC12A9Q9BXP2 914 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 ASPSCR1Q9BZE9 553 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 TRIM4Q9C037 500 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 FAM83DQ9H4H8 585 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 DTLQ9NZJ0 730 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 PKD2L2Q9NZM6 624 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 PDP2Q9P2J9 529 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 KCNK6Q9Y257 313 aa13.04□□□□□ -0.32
RPS28-204ENST00000602140 MYO18BQ8IUG5 2567 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 SYCE3A1L190 88 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 B4E171 279 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 ANKRD66B4E2M5 251 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 KCNK1O00180 336 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 SNX2O60749 519 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 JCHAINP01591 159 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 MMP2P08253 660 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 KRT7P08729 469 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 ACP5P13686 325 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 LIFP15018 202 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 TSPAN7P41732 249 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 RAB15P59190 212 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 FAM182AQ5T1J6 154 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 ANKS6Q68DC2 871 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 IYDQ6PHW0 289 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 WDR74Q6RFH5 385 aaPredicted RBP13.03□□□□□ -0.32
RPS28-204ENST00000602140 BMPERQ8N8U9 685 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 CCHCR1Q8TD31 782 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 NCSTNQ92542 709 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 PACSIN1Q9BY11 444 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 STN1Q9H668 368 aaKnown RBP13.03□□□□□ -0.32
RPS28-204ENST00000602140 RMI1Q9H9A7 625 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 SARS2Q9NP81 518 aaKnown RBP13.03□□□□□ -0.32
RPS28-204ENST00000602140 UVRAGQ9P2Y5 699 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 NENFQ9UMX5 172 aa13.03□□□□□ -0.32
RPS28-204ENST00000602140 RGSL1A5PLK6 1076 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 A6NCN8 305 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 GRID2O43424 1007 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 RAD1O60671 282 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 H2AFZP0C0S5 128 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 F3P13726 295 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 KDELR1P24390 212 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 CASP14P31944 242 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 MAPK9P45984 424 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 CSRP3P50461 194 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms