RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SKILP12757 684 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 CCR10P46092 362 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 MC2RQ01718 297 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 MC1RQ01726 317 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 SRSF1Q07955 248 aaKnown RBP eCLIP17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 KIR2DS5Q14953 304 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 CLCA4Q14CN2 919 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 CRTC2Q53ET0 693 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 TDRD12Q587J7 1177 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 ANKRD20A8PQ5CZ79 823 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 NKAIN2Q5VXU1 208 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 IYDQ6PHW0 289 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 PATE1Q8WXA2 126 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 SCAMP4Q969E2 229 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 SLC45A3Q96JT2 553 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 ZNF670Q9BS34 389 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 FUCA2Q9BTY2 467 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 TDRD1Q9BXT4 1180 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 FAM83DQ9H4H8 585 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 RAD18Q9NS91 495 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 PKD2L2Q9NZM6 624 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 ZNHIT2Q9UHR6 403 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 EFCAB7A8K855 629 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 RAD1O60671 282 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 CLCNKAP51800 687 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 TPM4P67936 248 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 HHEXQ03014 270 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 E4F1Q66K89 784 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 LYSMD3Q7Z3D4 306 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 ARHGAP22Q7Z5H3 698 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 NLGN4XQ8N0W4 816 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 KCTD6Q8NC69 237 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 NLGN4YQ8NFZ3 816 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 SLC37A2Q8TED4 501 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 RIOK2Q9BVS4 552 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 NUP85Q9BW27 656 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 ADGRE3Q9BY15 652 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 ZMYND15Q9H091 742 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 THAP2Q9H0W7 228 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 CARD9Q9H257 536 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 PCDH9Q9HC56 1237 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 CD84Q9UIB8 345 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 PILRAQ9UKJ1 303 aa17.67■□□□□ 0.42
SHKBP1-227ENST00000602011 DNAJC6O75061 913 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 KRT7P08729 469 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 TCF4P15884 667 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 SSR1P43307 286 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 SPINT3P49223 89 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 PPM1FP49593 454 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 ARSDP51689 593 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 ARSEP51690 589 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 HGSNATQ68CP4 663 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 FAM129CQ86XR2 697 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 PLXDC1Q8IUK5 500 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 BMPERQ8N8U9 685 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 PTCD2Q8WV60 388 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 PMEPA1Q969W9 287 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 NAP1L5Q96NT1 182 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 SRPK1Q96SB4 655 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 MLPHQ9BV36 600 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 SPRY4Q9C004 299 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 UCK1Q9HA47 277 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 CHKBQ9Y259 395 aa17.66■□□□□ 0.42
SHKBP1-227ENST00000602011 ANKRD66B4E2M5 251 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 CLDN7O95471 211 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 PRLP01236 227 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 F3P13726 295 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 LIFP15018 202 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 CSF2RBP32927 897 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 ZBED6P86452 979 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 ABHD18Q0P651 414 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 DPYSL3Q14195 570 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 MAP7Q14244 749 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 PDPK2PQ6A1A2 396 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 TXNRD3NBQ6F5E7 133 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 ALKBH5Q6P6C2 394 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 MARK2Q7KZI7 788 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 CHST15Q7LFX5 561 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 PTRH1Q86Y79 214 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 ARRDC2Q8TBH0 407 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 NCSTNQ92542 709 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 ZNF830Q96NB3 372 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 XPO4Q9C0E2 1151 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 OCIAD1Q9NX40 245 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 UVRAGQ9P2Y5 699 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 CNOT6Q9ULM6 557 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 PLEKHM1Q9Y4G2 1056 aa17.65■□□□□ 0.42
SHKBP1-227ENST00000602011 SDK2Q58EX2 2172 aa17.64■□□□□ 0.42
SHKBP1-227ENST00000602011 FLNCQ14315 2725 aa17.64■□□□□ 0.42
SHKBP1-227ENST00000602011 ZFC3H1O60293 1989 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 C1orf232A0A0U1RR37 186 aa17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 TOX3O15405 576 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 NUAK1O60285 661 aa17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 MAP3K6O95382 1288 aa17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 DSC2Q02487 901 aa17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 KCNAB2Q13303 367 aa17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 HENMT1Q5T8I9 393 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 NCBP2-AS2Q69YL0 99 aa17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 RFLNAQ6ZTI6 216 aa17.64■□□□□ 0.41
SHKBP1-227ENST00000602011 PHYKPLQ8IUZ5 450 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms