RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 HLTFQ14527 1009 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 SLMAPQ14BN4 828 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 DUOXA1Q1HG43 343 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 STEAP4Q687X5 459 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 KIAA0895LQ68EN5 471 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3GQ6DHY5 549 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3CQ6IPX1 549 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 ZNF449Q6P9G9 518 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 CYS1Q717R9 158 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 HSD11B1LQ7Z5J1 315 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 FAM124AQ86V42 546 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3Q8IZP1 549 aaPredicted RBP11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 MYRIPQ8NFW9 859 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 FAM174AQ8TBP5 190 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 SCG3Q8WXD2 468 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 STAMBPL1Q96FJ0 436 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 WDR83Q9BRX9 315 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 SLC17A9Q9BYT1 436 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 PIH1D1Q9NWS0 290 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 SAMD15Q9P1V8 674 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 NFU1Q9UMS0 254 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 DMTF1Q9Y222 760 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 GPSM3Q9Y4H4 160 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 ARL5AQ9Y689 179 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 FLNBO75369 2602 aaKnown RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 IGLON5A6NGN9 336 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 METTL12A8MUP2 240 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 ARHGAP33O14559 1287 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 TOR1BO14657 336 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 SH3BP5O60239 455 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 NDUFS2O75306 463 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 SPAG6O75602 509 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 RECQL5O94762 991 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 IGHV4-34P06331 123 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 BPIP17213 487 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 HOXD12P35452 270 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 ELK3P41970 407 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 PPP2CBP62714 309 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 PPP2CAP67775 309 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 PTPRRQ15256 657 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 BBS9Q3SYG4 887 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 ANKRD20A4Q4UJ75 823 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 SETMARQ53H47 684 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 SOWAHCQ53LP3 525 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 SPANXN3Q5MJ09 141 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 HENMT1Q5T8I9 393 aaKnown RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 SEL1L3Q68CR1 1132 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 KIAA0930Q6ICG6 404 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 C19orf48Q6RUI8 117 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 MPP5Q8N3R9 675 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 PNPLA1Q8N8W4 532 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 OR4K2Q8NGD2 314 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 OR13J1Q8NGT2 312 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 DNASE2BQ8WZ79 361 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 CENPTQ96BT3 561 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 CDKN2AIPNLQ96HQ2 116 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 PWWP2AQ96N64 755 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 BBC3Q96PG8 261 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 ORAI3Q9BRQ5 295 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 ZSCAN5AQ9BUG6 496 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 WRAP53Q9BUR4 548 aaKnown RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 GPR174Q9BXC1 333 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 TXLNGYQ9BZA5 131 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 FAM83DQ9H4H8 585 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 C6orf106Q9H6K1 298 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 CHRAC1Q9NRG0 131 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 DNAAF2Q9NVR5 837 aaKnown RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 APPL1Q9UKG1 709 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 HS3ST3A1Q9Y663 406 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 PIKFYVEQ9Y2I7 2098 aa11.59□□□□□ -0.55
CHMP2A-207ENST00000600804 ASXL3Q9C0F0 2248 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 ZCWPW2A0A1B0GU75 182 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 A0A1W2PPC4 97 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 AGAP14A8MT82 685 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 LZTS3O60299 673 aaPredicted RBP11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 POLBP06746 335 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 HOXC4P09017 264 aaPredicted RBP11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 PAMP19021 973 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 SPAM1P38567 509 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 ETV3P41162 512 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 MAGEA4P43358 317 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 VSNL1P62760 191 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 CRADDP78560 199 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 XIAPP98170 497 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 SGCGQ13326 291 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 FGL2Q14314 439 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 CRYMQ14894 314 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 ACOX1Q15067 660 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 ESRP1Q6NXG1 681 aaKnown RBP11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 CASC4Q6P4E1 433 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 EMBQ6PCB8 327 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 Q6ZVL8 140 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 IGDCC3Q8IVU1 814 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 LMNTD2Q8IXW0 634 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 ZBED8Q8IZ13 594 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 TRAM1L1Q8N609 369 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 TP53I13Q8NBR0 393 aaPredicted RBP11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 TMEM145Q8NBT3 493 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 PYROXD1Q8WU10 500 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms