RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 CDH6P55285 790 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 MAZP56270 477 aaKnown RBP13.69□□□□□ -0.22
IRF3-225ENST00000600022 OR1D5P58170 312 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 DR1Q01658 176 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 MTM1Q13496 603 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 TFDP2Q14188 446 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 DPYSL3Q14195 570 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 HLTFQ14527 1009 aaKnown RBP eCLIP13.69□□□□□ -0.22
IRF3-225ENST00000600022 PARP15Q460N3 678 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 NRROSQ86YC3 692 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 SLITRK4Q8IW52 837 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 TTC13Q8NBP0 860 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 OR56A4Q8NGH8 313 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.69□□□□□ -0.22
IRF3-225ENST00000600022 HCAR2Q8TDS4 363 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 SGF29Q96ES7 293 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 HERPUD2Q9BSE4 406 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 FRMD8P1Q9BZ68 369 aaPredicted RBP13.69□□□□□ -0.22
IRF3-225ENST00000600022 STRADBQ9C0K7 418 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 DDX47Q9H0S4 455 aaKnown RBP13.69□□□□□ -0.22
IRF3-225ENST00000600022 DPEP2Q9H4A9 486 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 CYP4F12Q9HCS2 524 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 ARFGAP3Q9NP61 516 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 MOSPD1Q9UJG1 213 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 APPL1Q9UKG1 709 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 ACSL6Q9UKU0 697 aa13.69□□□□□ -0.22
IRF3-225ENST00000600022 HEXIM1O94992 359 aaKnown RBP13.68□□□□□ -0.22
IRF3-225ENST00000600022 GAS8O95995 478 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 CD48P09326 243 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 TRIM23P36406 574 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 SUOXP51687 545 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 ZNF135P52742 658 aaPredicted RBP13.68□□□□□ -0.22
IRF3-225ENST00000600022 EIF3IQ13347 325 aaKnown RBP13.68□□□□□ -0.22
IRF3-225ENST00000600022 CLCA4Q14CN2 919 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 SIX1Q15475 284 aaPredicted RBP13.68□□□□□ -0.22
IRF3-225ENST00000600022 TBR1Q16650 682 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 AMZ1Q400G9 498 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 C14orf28Q4W4Y0 310 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 KAZNQ674X7 775 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 ERAP2Q6P179 960 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 SYDE1Q6ZW31 735 aaPredicted RBP13.68□□□□□ -0.22
IRF3-225ENST00000600022 MTERF4Q7Z6M4 381 aaKnown RBP13.68□□□□□ -0.22
IRF3-225ENST00000600022 DTX1Q86Y01 620 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 ARHGAP12Q8IWW6 846 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 NPWQ8N729 165 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 RCBTB1Q8NDN9 531 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 PATE1Q8WXA2 126 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 ECHDC3Q96DC8 303 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 ZNF641Q96N77 438 aaPredicted RBP13.68□□□□□ -0.22
IRF3-225ENST00000600022 TMEM74Q96NL1 305 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 KCTD15Q96SI1 283 aaPredicted RBP13.68□□□□□ -0.22
IRF3-225ENST00000600022 HEMGNQ9BXL5 484 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 DHX35Q9H5Z1 703 aaKnown RBP13.68□□□□□ -0.22
IRF3-225ENST00000600022 RAB21Q9UL25 225 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 PLEKHM1Q9Y4G2 1056 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
IRF3-225ENST00000600022 TRAFD1O14545 582 aaPredicted RBP13.67□□□□□ -0.22
IRF3-225ENST00000600022 ECEL1O95672 775 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 FGF1P05230 155 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 LIPCP11150 499 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 IL4RP24394 825 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 AK4P27144 223 aaPredicted RBP13.67□□□□□ -0.22
IRF3-225ENST00000600022 POLD2P49005 469 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 TPI1P60174 286 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 GUCY2DQ02846 1103 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 CUL1Q13616 776 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 CYP1B1Q16678 543 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 PHF19Q5T6S3 580 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 NKAIN2Q5VXU1 208 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 AFMIDQ63HM1 303 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 PNCKQ6P2M8 343 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 BRAT1Q6PJG6 821 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 CCDC137Q6PK04 289 aaKnown RBP13.67□□□□□ -0.22
IRF3-225ENST00000600022 BBS12Q6ZW61 710 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 RFX6Q8HWS3 928 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.67□□□□□ -0.227e-8■■■■■ 60.2
IRF3-225ENST00000600022 CSPG4P5Q96PW8 444 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 SMIM14Q96QK8 99 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 NUDT22Q9BRQ3 303 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 CATSPERBQ9H7T0 1116 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 STARD5Q9NSY2 213 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 IL17BQ9UHF5 180 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 AMACRQ9UHK6 382 aa13.67□□□□□ -0.22
IRF3-225ENST00000600022 ARHGEF17Q96PE2 2063 aaPredicted RBP13.67□□□□□ -0.22
IRF3-225ENST00000600022 TCRBV7S2A1N4TA0A589 114 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 H3BRJ5 948 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 TMX2-CTNND1H3BSU7 103 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 CACNB4O00305 520 aaPredicted RBP13.66□□□□□ -0.22
IRF3-225ENST00000600022 TERTO14746 1132 aaKnown RBP13.66□□□□□ -0.22
IRF3-225ENST00000600022 RAD51CO43502 376 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 CEACAM5P06731 702 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 H2AFXP16104 143 aaPredicted RBP13.66□□□□□ -0.22
IRF3-225ENST00000600022 ZFXP17010 805 aaPredicted RBP13.66□□□□□ -0.22
IRF3-225ENST00000600022 MPSTP25325 297 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 ALDH4A1P30038 563 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 HTR7P34969 479 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 COILP38432 576 aaPredicted RBP13.66□□□□□ -0.22
IRF3-225ENST00000600022 ARL4AP40617 200 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 CSNK1DP48730 415 aa13.66□□□□□ -0.22
IRF3-225ENST00000600022 SCNN1BP51168 640 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms