RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 PSMD3O43242 534 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 GOLGA6DP0CG33 693 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 TPH1P17752 444 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 MAGEA6P43360 314 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 SIM1P81133 766 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 ZNF648Q5T619 568 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 PDPK2PQ6A1A2 396 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 ZNF534Q76KX8 674 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 FAM181AQ8N9Y4 354 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 OR52K1Q8NGK4 314 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 OR13C4Q8NGS5 318 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 VPS35Q96QK1 796 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 CDC6Q99741 560 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 C19orf43Q9BQ61 176 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 BOCQ9BWV1 1114 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 SPATA16Q9BXB7 569 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 CYP4F12Q9HCS2 524 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 EIF2B3Q9NR50 452 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 RAD18Q9NS91 495 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 GOLGA6AQ9NYA3 693 aa19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.35■□□□□ 0.69
SHKBP1-221ENST00000599833 MROH6A6NGR9 719 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 AGAP14A8MT82 685 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 TNFSF14O43557 240 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 TNFP01375 233 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 ADRB1P08588 477 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 FTH1P19P0C7X4 201 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 MYF5P13349 255 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 LPOP22079 712 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 SPAM1P38567 509 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 ACADVLP49748 655 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 BLKP51451 505 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 DNAJC3Q13217 504 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 PEX6Q13608 980 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 DEFB133Q30KQ1 61 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 INAVAQ3KP66 663 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 PYCR3Q53H96 274 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 CCDC137Q6PK04 289 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 RD3Q7Z3Z2 195 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 SFTPA2Q8IWL1 248 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 FSTL5Q8N475 847 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 OR4K2Q8NGD2 314 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 GPBAR1Q8TDU6 330 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 GLYATL1Q969I3 302 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 CNDP2Q96KP4 475 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 NAP1L3Q99457 506 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 SLC13A1Q9BZW2 595 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 ARFGAP3Q9NP61 516 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 VPS18Q9P253 973 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 FTSJ1Q9UET6 329 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 PLEKHM1Q9Y4G2 1056 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 SAR1BQ9Y6B6 198 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 RP1P56715 2156 aa19.34■□□□□ 0.69
SHKBP1-221ENST00000599833 PPFIA2O75334 1257 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 LDOC1O95751 146 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 PMLP29590 882 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 PTGIRP43119 386 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 FNTAP49354 379 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 KCNJ11Q14654 390 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 TCEA2Q15560 299 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 CHRNA6Q15825 494 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 CERCAMQ5T4B2 595 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 DOK6Q6PKX4 331 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 ADGRG6Q86SQ4 1221 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 APOLD1Q96LR9 279 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 CARS2Q9HA77 564 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 SMOXQ9NWM0 555 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 ATXN10Q9UBB4 475 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 FKBPLQ9UIM3 349 aa19.33■□□□□ 0.68
SHKBP1-221ENST00000599833 CTAGE9A4FU28 777 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 PRR19A6NJB7 356 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 H7C0S8 307 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 CHUKO15111 745 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 UGT1A9O60656 530 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 TOP3BO95985 862 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 UGT1A6P19224 532 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 UGT1A1P22309 533 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 UGT1A4P22310 534 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 ACP1P24666 158 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 UGT1A3P35503 534 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 UGT1A5P35504 534 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 ADCY8P40145 1251 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 TNNT3P45378 269 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 ETF1P62495 437 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 POU6F1Q14863 301 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 TRIP13Q15645 432 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 C6orf132Q5T0Z8 1188 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 FAM151BQ6UXP7 276 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 C4orf22Q6V702 233 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 SLCO2A1Q92959 643 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 DNAJC1Q96KC8 554 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 UGT1A7Q9HAW7 530 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 UGT1A10Q9HAW8 530 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 UGT1A8Q9HAW9 530 aa19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 TRNAU1APQ9NX07 287 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-221ENST00000599833 GLYATL1P3A0A0U1RQE8 302 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 NEMP2A6NFY4 417 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 C2orf81A6NN90 581 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 CCL22O00626 93 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 STX7O15400 261 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms