RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TRA2AQ13595 282 aaKnown RBP eCLIP14.56□□□□□ -0.08
IRF3-223ENST00000599223 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.56□□□□□ -0.08
IRF3-223ENST00000599223 TMEM164Q5U3C3 297 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 FAM129CQ86XR2 697 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 PQLC3Q8N755 202 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 LPCAT1Q8NF37 534 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 COL26A1Q96A83 441 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 MRFAP1L1Q96HT8 127 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 DDA1Q9BW61 102 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 ZMYND15Q9H091 742 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 BRD8Q9H0E9 1235 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 TBC1D29Q9UFV1 150 aa14.56□□□□□ -0.08
IRF3-223ENST00000599223 HEMK1Q9Y5R4 338 aaPredicted RBP14.56□□□□□ -0.08
IRF3-223ENST00000599223 DOPEY2Q9Y3R5 2298 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 EFCAB7A8K855 629 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 SUV39H1O43463 412 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 MMP2P08253 660 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 CSTF2P33240 577 aaKnown RBP eCLIP14.55□□□□□ -0.08
IRF3-223ENST00000599223 SSR1P43307 286 aaKnown RBP14.55□□□□□ -0.08
IRF3-223ENST00000599223 EPHB1P54762 984 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 SLC10A2Q12908 348 aaPredicted RBP14.55□□□□□ -0.08
IRF3-223ENST00000599223 LRP8Q14114 963 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 HENMT1Q5T8I9 393 aaKnown RBP14.55□□□□□ -0.08
IRF3-223ENST00000599223 ZSCAN1Q8NBB4 408 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 CTRCQ99895 268 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 RBM22Q9NW64 420 aaKnown RBP eCLIP14.55□□□□□ -0.084e-6■□□□□ 10.1
IRF3-223ENST00000599223 SLC39A1Q9NY26 324 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 PDP2Q9P2J9 529 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 KCNK6Q9Y257 313 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 NBASA2RRP1 2371 aa14.55□□□□□ -0.08
IRF3-223ENST00000599223 C1orf232A0A0U1RR37 186 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 A0A1W2PQJ5 194 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 B4E171 279 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 MATN3O15232 486 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 DUX1O43812 170 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 RAD1O60671 282 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 ASMTLO95671 621 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 ACP5P13686 325 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 TSPAN7P41732 249 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 CSRP3P50461 194 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 ATP1A2P50993 1020 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 UBASH3AP57075 661 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 GPLD1P80108 840 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 FANCCQ00597 558 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 HHEXQ03014 270 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 NFATC2Q13469 925 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 QPCTQ16769 361 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 ANKRD20A8PQ5CZ79 823 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 SNAP47Q5SQN1 464 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 TMEM71Q6P5X7 295 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 NLRP8Q86W28 1048 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 LRRC49Q8IUZ0 686 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 NRSN1Q8IZ57 195 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 IL22RA1Q8N6P7 574 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 EXD1Q8NHP7 514 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 ZNF564Q8TBZ8 553 aaPredicted RBP14.54□□□□□ -0.08
IRF3-223ENST00000599223 FATE1Q969F0 183 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 FAF2Q96CS3 445 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 EID2BQ96D98 161 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 RTP4Q96DX8 246 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 LYSMD1Q96S90 227 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 SLC38A3Q99624 504 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 ZNF670Q9BS34 389 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 PCDH9Q9HC56 1237 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 APMAPQ9HDC9 416 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 ARFGAP3Q9NP61 516 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 VPS18Q9P253 973 aa14.54□□□□□ -0.08
IRF3-223ENST00000599223 A8MU76 341 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 ZW10O43264 779 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 GYPCP04921 128 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 SERPING1P05155 500 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 SPINT3P49223 89 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 ZBTB17Q13105 803 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 PEX6Q13608 980 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 GALNT3Q14435 633 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 IFI16Q16666 785 aaKnown RBP14.53□□□□□ -0.08
IRF3-223ENST00000599223 CCDC122Q5T0U0 273 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 ZNF648Q5T619 568 aaPredicted RBP14.53□□□□□ -0.08
IRF3-223ENST00000599223 TIGD7Q6NT04 549 aaPredicted RBP14.53□□□□□ -0.08
IRF3-223ENST00000599223 XKR5Q6UX68 686 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 ATG14Q6ZNE5 492 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 CHST15Q7LFX5 561 aaPredicted RBP14.53□□□□□ -0.08
IRF3-223ENST00000599223 LYSMD3Q7Z3D4 306 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 CACNA2D3Q8IZS8 1091 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 CCDC112Q8NEF3 446 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 OR10G6Q8NH81 332 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 SYN2Q92777 582 aaPredicted RBP14.53□□□□□ -0.08
IRF3-223ENST00000599223 RNF31Q96EP0 1072 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 TSGA13Q96PP4 275 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 PACSIN1Q9BY11 444 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 SPRY4Q9C004 299 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 GEMIN8Q9NWZ8 242 aaKnown RBP14.53□□□□□ -0.08
IRF3-223ENST00000599223 DTLQ9NZJ0 730 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 IFNKQ9P0W0 207 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 IL17BQ9UHF5 180 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 ZNHIT2Q9UHR6 403 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 PILRAQ9UKJ1 303 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 ADGRG1Q9Y653 693 aa14.53□□□□□ -0.08
IRF3-223ENST00000599223 MYO1FO00160 1098 aa14.52□□□□□ -0.09
IRF3-223ENST00000599223 KCNK1O00180 336 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms