RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 NCF2P19878 526 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 SEMG2Q02383 582 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 SNCBQ16143 134 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 MYLK3Q32MK0 819 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 FAM219BQ5XKK7 198 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 ADGRG2Q8IZP9 1017 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 PHTF2Q8N3S3 785 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 TEX9Q8N6V9 391 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 PAF1Q8N7H5 531 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 LRRC3BQ96PB8 259 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 OAS3Q9Y6K5 1087 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 B2RBV5 119 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 MTHFD2P13995 350 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 EPHA3P29320 983 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 SERPINA4P29622 427 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 SNRPD1P62314 119 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 CACNG1Q06432 222 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 TBCCQ15814 346 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 ACCSLQ4AC99 568 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 SH2D4BQ5SQS7 431 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 TMEM215Q68D42 235 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 FAM151BQ6UXP7 276 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 TSPAN33Q86UF1 283 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 ADIPOR2Q86V24 386 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 SLC22A9Q8IVM8 553 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 LEMD2Q8NC56 503 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 GIMAP7Q8NHV1 300 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 ITFG1Q8TB96 612 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 ISG20Q96AZ6 181 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 GSTO2Q9H4Y5 243 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 TCF7L2Q9NQB0 619 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 REV3LO60673 3130 aa16.94■□□□□ 0.3
SHKBP1-216ENST00000598201 CAPN8A6NHC0 703 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 UBXN8O00124 270 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 IMPDH1P20839 514 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 SULT2A1Q06520 285 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 PDCD2Q16342 344 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 DPY19L3Q6ZPD9 716 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 FRMD7Q6ZUT3 714 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 C12orf76Q8N812 135 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 NAT16Q8N8M0 369 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 SIDT2Q8NBJ9 832 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 RBM15BQ8NDT2 890 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 NAT14Q8WUY8 206 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 ATOH8Q96SQ7 321 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 VPS9D1Q9Y2B5 631 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 SLC30A1Q9Y6M5 507 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 CXorf51AA0A1B0GTR3 108 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 NPIPB15A6NHN6 443 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 IQCF5A8MTL0 148 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 F8W8V4 182 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 DCXO43602 365 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 SERPINB5P36952 375 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 CCNHP51946 323 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 HK2P52789 917 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 ECT2LQ008S8 904 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 KCNC3Q14003 757 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 LSM12Q3MHD2 195 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 ZNF678Q5SXM1 525 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 POU5F2Q8N7G0 328 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 DERL2Q9GZP9 239 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 P2RY12Q9H244 342 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 TFB2MQ9H5Q4 396 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 SYTL2Q9HCH5 934 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 IL26Q9NPH9 171 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 ZDHHC7Q9NXF8 308 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 GTSE1Q9NYZ3 720 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 TBC1D14Q9P2M4 693 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 VTI1BQ9UEU0 232 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 SLC25A13Q9UJS0 675 aa16.93■□□□□ 0.3
SHKBP1-216ENST00000598201 LRRC14BA6NHZ5 514 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 SOBPA7XYQ1 873 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 SPECC1L-ADORA2AF8WAN1 911 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 UBFD1O14562 309 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 PRAMEF1O95521 474 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 TSPAN12O95859 305 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 BPIP17213 487 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 TSPAN8P19075 237 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 PTGER3P43115 390 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 NFKB2Q00653 900 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 CCDC85BQ15834 202 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 UNC50Q53HI1 259 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 AARS2Q5JTZ9 985 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 Q6ZVU0 165 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 CHST14Q8NCH0 376 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 VN1R2Q8NFZ6 395 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 RHEBL1Q8TAI7 183 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 KIAA1191Q96A73 305 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 ECHDC3Q96DC8 303 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 L3HYPDHQ96EM0 354 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 ZDHHC6Q9H6R6 413 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 DPP7Q9UHL4 492 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 MRPS23Q9Y3D9 190 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 EYSQ5T1H1 3165 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 SLCO1B7G3V0H7 640 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 CDC7O00311 574 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 CLGNO14967 610 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 LINC01565O15544 149 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms