RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 GRIK2Q13002 908 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 CSRP2Q16527 193 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 ZRANB3Q5FWF4 1079 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 TPRG1LQ5T0D9 272 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 ENPP7Q6UWV6 458 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 TRIM74Q86UV6 250 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 AGGF1Q8N302 714 aaeCLIP21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 OR13J1Q8NGT2 312 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 GDAP1Q8TB36 358 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 DTX3LQ8TDB6 740 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 SEC14L1Q92503 715 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 PEX13Q92968 403 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 MFSD3Q96ES6 412 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 GTPBP2Q9BX10 602 aaKnown RBP21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 FAM96AQ9H5X1 160 aa21.96■■□□□ 1.11
CHMP2A-204ENST00000597848 SPTY2D1-AS1A0A0U1RR47 76 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 FAM237BA0A1B0GVD1 139 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 CCDC162PA2VCL2 907 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 H7C0S8 307 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 GAPDHSO14556 408 aaPredicted RBP21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 ASMTLO95671 621 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 PSMA3P25788 255 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 CTSKP43235 329 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 ATXN3P54252 364 aaPredicted RBP21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 PDIA2Q13087 525 aaKnown RBP21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 PEX6Q13608 980 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 PRAMEF14Q5SWL7 426 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 DOK6Q6PKX4 331 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 ZDHHC24Q6UX98 284 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 CENPUQ71F23 418 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 TAS2R42Q7RTR8 314 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 IFT20Q8IY31 132 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 FBXO25Q8TCJ0 367 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 BTN2A2Q8WVV5 523 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 GLYATL1Q969I3 302 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 ZNF669Q96BR6 464 aaPredicted RBP21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 WDR92Q96MX6 357 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 ZDHHC5Q9C0B5 715 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 ARFGAP3Q9NP61 516 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 PARD6AQ9NPB6 346 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 TREX1Q9NSU2 369 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 CRLS1Q9UJA2 301 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 MOSPD1Q9UJG1 213 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 CNOT6Q9ULM6 557 aaKnown RBP21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 TMEM98Q9Y2Y6 226 aa21.95■■□□□ 1.1
CHMP2A-204ENST00000597848 GPR39O43194 453 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 ENGP17813 658 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 ELK3P41970 407 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 ACVR1Q04771 509 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 NFATC2Q13469 925 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 FZD2Q14332 565 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 HLTFQ14527 1009 aaKnown RBP eCLIP21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 ANKRD20A4Q4UJ75 823 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 IL27RAQ6UWB1 636 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 MACC1Q6ZN28 852 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 MICALCLQ6ZW33 695 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 SNX20Q7Z614 316 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 EBNA1BP2Q99848 306 aaKnown RBP21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 TRIM56Q9BRZ2 755 aaKnown RBP21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 GPR27Q9NS67 375 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 CHMP2BQ9UQN3 213 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 RPS6KL1Q9Y6S9 549 aa21.94■■□□□ 1.1
CHMP2A-204ENST00000597848 TMEM202A6NGA9 273 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 OR51F1A6NGY5 319 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 BHMG1C9JSJ3 638 aaPredicted RBP21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 VAPBO95292 243 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 GOT2P00505 430 aaKnown RBP21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 POLBP06746 335 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 PGAM1P18669 254 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 PAMP19021 973 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 CACNG1Q06432 222 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 HLA-BQ31612 363 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 GPR33Q49SQ1 333 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 ZNF542PQ5EBM4 170 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 ZNF648Q5T619 568 aaPredicted RBP21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 AFTPHQ6ULP2 937 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 RD3Q7Z3Z2 195 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 PARGQ86W56 976 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 CCDC25Q86WR0 208 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 PHYKPLQ8IUZ5 450 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 ANKMY2Q8IV38 441 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 IGDCC3Q8IVU1 814 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 OR56A4Q8NGH8 313 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 ULK4Q96C45 1275 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 LRRC39Q96DD0 335 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 COX14Q96I36 57 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 VPS35Q96QK1 796 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 NAT9Q9BTE0 207 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 GAREM1Q9H706 876 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 SAYSD1Q9NPB0 183 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 DNAJC28Q9NX36 388 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 KLQ9UEF7 1012 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 TMPRSS11EQ9UL52 423 aa21.93■■□□□ 1.1
CHMP2A-204ENST00000597848 MYLKQ15746 1914 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 GFRA3O60609 400 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 POLD2P49005 469 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 SRP54P61011 504 aaKnown RBP21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 PPARDQ03181 441 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 EIF2B5Q13144 721 aaKnown RBP21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 TMEM135Q86UB9 458 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms