RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CHST15Q7LFX5 561 aaPredicted RBP12□□□□□ -0.49
SOX2-OT-228ENST00000597828 LUZP1Q86V48 1076 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 SFRP1Q8N474 314 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 IL22RA1Q8N6P7 574 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 PQLC3Q8N755 202 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 BMPERQ8N8U9 685 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZSCAN1Q8NBB4 408 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 AGBL5Q8NDL9 886 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 CTRCQ99895 268 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 ANP32EQ9BTT0 268 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 PACSIN1Q9BY11 444 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 CEP41Q9BYV8 373 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 CBX8Q9HC52 389 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 PCDH9Q9HC56 1237 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 APMAPQ9HDC9 416 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 SLC39A1Q9NY26 324 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 TBC1D29Q9UFV1 150 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZNHIT2Q9UHR6 403 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 NENFQ9UMX5 172 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 PCDHGA3Q9Y5H0 932 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 SPTA1P02549 2419 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 PTPN13Q12923 2485 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 A0A1W2PQJ5 194 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 MYO1FO00160 1098 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 TERTO14746 1132 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 MATN3O15232 486 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 DUX1O43812 170 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 RAD1O60671 282 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 SLC4A1P02730 911 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 GYPCP04921 128 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 ATP1A2P50993 1020 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 HHEXQ03014 270 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 KCNC4Q03721 635 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZBTB17Q13105 803 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 IFI16Q16666 785 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 CLPPQ16740 277 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 QPCTQ16769 361 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 HADHQ16836 314 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 HENMT1Q5T8I9 393 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 TIGD7Q6NT04 549 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 TMEM71Q6P5X7 295 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 ALKBH5Q6P6C2 394 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 NRSN1Q8IZ57 195 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 CACNA2D3Q8IZS8 1091 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 NDUFAF2Q8N183 169 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 EXD1Q8NHP7 514 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 AHCYL2Q96HN2 611 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 SLC38A3Q99624 504 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZNF670Q9BS34 389 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 TBC1D10AQ9BXI6 508 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 DTLQ9NZJ0 730 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 KLHL3Q9UH77 587 aa11.99□□□□□ -0.49
SOX2-OT-228ENST00000597828 A6NCN8 305 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 KCNK1O00180 336 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZW10O43264 779 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 SNX2O60749 519 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 PIRTP0C851 137 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 CCNCP24863 283 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 CD86P42081 329 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 SPINT3P49223 89 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 GPLD1P80108 840 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZBED6P86452 979 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 SQSTM1Q13501 440 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 PLA2G4EQ3MJ16 856 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 ALS2CLQ60I27 953 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 B4GALNT4Q76KP1 1039 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 LYSMD3Q7Z3D4 306 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 NLRP8Q86W28 1048 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 PTRH1Q86Y79 214 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 CCDC13Q8IYE1 715 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 UNC5BQ8IZJ1 945 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 KCTD6Q8NC69 237 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 OR10G6Q8NH81 332 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 FAF2Q96CS3 445 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 EID2BQ96D98 161 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 HDAC11Q96DB2 347 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 RTP4Q96DX8 246 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 TSGA13Q96PP4 275 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 DDA1Q9BW61 102 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 B3GNT4Q9C0J1 378 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 VPS18Q9P253 973 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 RELNP78509 3460 aa11.98□□□□□ -0.49
SOX2-OT-228ENST00000597828 NUP210LQ5VU65 1888 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 LOC101059948A0A1B0GTJ6 334 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 B4E171 279 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 SUV39H1O43463 412 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 PPFIA2O75334 1257 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 PROSCO94903 275 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 PYGLP06737 847 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 TSPAN7P41732 249 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 GFERP55789 205 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 UBASH3AP57075 661 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 PEX6Q13608 980 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 LRP8Q14114 963 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 TIPARPQ7Z3E1 657 aaKnown RBP11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 ARHGAP22Q7Z5H3 698 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 LRRC49Q8IUZ0 686 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 CNTD1Q8N815 330 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 CCNYQ8ND76 341 aa11.97□□□□□ -0.49
SOX2-OT-228ENST00000597828 CCDC112Q8NEF3 446 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms