RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	ACP5	P13686	325 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	LIF	P15018	202 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	CCNC	P24863	283 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	UGT1A3	P35503	534 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	FASLG	P48023	281 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	SPINT3	P49223	89 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	ATP1A2	P50993	1020 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	GPLD1	P80108	840 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	ZBED6	P86452	979 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	HHEX	Q03014	270 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	SLC10A2	Q12908	348 aa	Predicted RBP	10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	LRP8	Q14114	963 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	QPCT	Q16769	361 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	ANKS6	Q68DC2	871 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	TMEM71	Q6P5X7	295 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	XKR5	Q6UX68	686 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	CHST15	Q7LFX5	561 aa	Predicted RBP	10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	NLRP8	Q86W28	1048 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	CACNA2D3	Q8IZS8	1091 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	IL22RA1	Q8N6P7	574 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	PQLC3	Q8N755	202 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	CCDC112	Q8NEF3	446 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	OR10G6	Q8NH81	332 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	FATE1	Q969F0	183 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	AHCYL2	Q96HN2	611 aa	Known RBP	10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	TSGA13	Q96PP4	275 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	CTRC	Q99895	268 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	ZNF670	Q9BS34	389 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	DDA1	Q9BW61	102 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	SLC12A9	Q9BXP2	914 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	BRD8	Q9H0E9	1235 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	PCDH9	Q9HC56	1237 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	ARFGAP3	Q9NP61	516 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	CAPN11	Q9UMQ6	739 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	NENF	Q9UMX5	172 aa		10.44	□□□□□ -0.74
LSM4-205	ENST00000597776	TLN1	Q9Y490	2541 aa	Known RBP	10.44	□□□□□ -0.74
LSM4-205	ENST00000597776		A6NCN8	305 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	CYSRT1	A8MQ03	144 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776		B4E171	279 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	KCNK1	O00180	336 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	DUX1	O43812	170 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	RAD1	O60671	282 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	PROSC	O94903	275 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	JCHAIN	P01591	159 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	GYPC	P04921	128 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	MMP2	P08253	660 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	CA4	P22748	312 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	TSPAN7	P41732	249 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	CD86	P42081	329 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	MAPK9	P45984	424 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	UBASH3A	P57075	661 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	RPL26	P61254	145 aa	Known RBP	10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	ZBTB17	Q13105	803 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	GALNT3	Q14435	633 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	ZNF648	Q5T619	568 aa	Predicted RBP	10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	DCAF12	Q5T6F0	453 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	HENMT1	Q5T8I9	393 aa	Known RBP	10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	BMPER	Q8N8U9	685 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	CCNY	Q8ND76	341 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	NCSTN	Q92542	709 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	RAPGEF5	Q92565	580 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	FAF2	Q96CS3	445 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	LYSMD1	Q96S90	227 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	DPYSL5	Q9BPU6	564 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	PACSIN1	Q9BY11	444 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	CEP41	Q9BYV8	373 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	FAM83D	Q9H4H8	585 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	DTL	Q9NZJ0	730 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	VPS18	Q9P253	973 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	CTTNBP2NL	Q9P2B4	639 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	PDP2	Q9P2J9	529 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	AMACR	Q9UHK6	382 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	DNPEP	Q9ULA0	475 aa		10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	RPL26L1	Q9UNX3	145 aa	Known RBP	10.43	□□□□□ -0.74
LSM4-205	ENST00000597776	SPTA1	P02549	2419 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	UBR5	O95071	2799 aa	Predicted RBP	10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	SYCE3	A1L190	88 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	TERT	O14746	1132 aa	Known RBP	10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	SUV39H1	O43463	412 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	SLC4A1	P02730	911 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	PIRT	P0C851	137 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	CES1	P23141	567 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	CSRP3	P50461	194 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	PDK2	Q15119	407 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	ZFYVE27	Q5T4F4	411 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	ALS2CL	Q60I27	953 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	IYD	Q6PHW0	289 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	WDR74	Q6RFH5	385 aa	Predicted RBP	10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	ATG14	Q6ZNE5	492 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	LYSMD3	Q7Z3D4	306 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	KDELC2	Q7Z4H8	507 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	CCDC13	Q8IYE1	715 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	UNC5B	Q8IZJ1	945 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	CNTD1	Q8N815	330 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	EID2B	Q96D98	161 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	HDAC11	Q96DB2	347 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	RTP4	Q96DX8	246 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	RNF31	Q96EP0	1072 aa		10.42	□□□□□ -0.74
LSM4-205	ENST00000597776	MLPH	Q9BV36	600 aa	Predicted RBP	10.42	□□□□□ -0.74

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