RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 DBX2Q6ZNG2 339 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 GATAD2AQ86YP4 633 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 KNL1Q8NG31 2342 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 PDXPQ96GD0 296 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 DNAJC1Q96KC8 554 aaKnown RBP19.89■□□□□ 0.77
CCDC61-205ENST00000596161 IL22Q9GZX6 179 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 XAB2Q9HCS7 855 aaKnown RBP19.89■□□□□ 0.77
CCDC61-205ENST00000596161 VPS18Q9P253 973 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 KLF15Q9UIH9 416 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 FKBPLQ9UIM3 349 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 RIMKLBQ9ULI2 386 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 CNOT6Q9ULM6 557 aaKnown RBP19.89■□□□□ 0.77
CCDC61-205ENST00000596161 SLC17A4Q9Y2C5 497 aa19.89■□□□□ 0.77
CCDC61-205ENST00000596161 FAM187AA6NFU0 413 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 MROH6A6NGR9 719 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 NDC80O14777 642 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 SDC3O75056 442 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 TMEM63AO94886 807 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 PRAMEF1O95521 474 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 CEACAM5P06731 702 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 IVLP07476 585 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 CTSEP14091 401 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 TMPRSS15P98073 1019 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 ATP13A5Q4VNC0 1218 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 PCID2Q5JVF3 399 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 ANKRD22Q5VYY1 191 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 ARMC3Q5W041 872 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 RD3Q7Z3Z2 195 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 TRIM74Q86UV6 250 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 NAXDQ8IW45 347 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 RBFAQ8N0V3 343 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 FSTL5Q8N475 847 aaPredicted RBP19.88■□□□□ 0.77
CCDC61-205ENST00000596161 NAT8LQ8N9F0 302 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 ZNF398Q8TD17 642 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 PEX13Q92968 403 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 SLC32A1Q9H598 525 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 CYP4F12Q9HCS2 524 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 TCAF1Q9Y4C2 921 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 CSNK1G3Q9Y6M4 447 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 SLC30A1Q9Y6M5 507 aa19.88■□□□□ 0.77
CCDC61-205ENST00000596161 H7C0S8 307 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 SMAPO00193 183 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 TM4SF5O14894 197 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 AQP9O43315 295 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 SRP72O76094 671 aaKnown RBP19.87■□□□□ 0.77
CCDC61-205ENST00000596161 ALPPL2P10696 532 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 ITGALP20701 1170 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 CSRP1P21291 193 aaKnown RBP19.87■□□□□ 0.77
CCDC61-205ENST00000596161 PSMA3P25788 255 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 ELOCQ15369 112 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 CCDC38Q502W7 563 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 PRRT3Q5FWE3 981 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 TSTD2Q5T7W7 516 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 RNASEH2BQ5TBB1 312 aaKnown RBP19.87■□□□□ 0.77
CCDC61-205ENST00000596161 IZUMO3Q5VZ72 239 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 ZNF534Q76KX8 674 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 KANSL1Q7Z3B3 1105 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 PIP4P1Q86T03 277 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 HOOK3Q86VS8 718 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 SDR16C5Q8N3Y7 309 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 MNS1Q8NEH6 495 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 ZNF548Q8NEK5 533 aaPredicted RBP19.87■□□□□ 0.77
CCDC61-205ENST00000596161 GDAP1Q8TB36 358 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 LMX1AQ8TE12 382 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 SETD7Q8WTS6 366 aaKnown RBP19.87■□□□□ 0.77
CCDC61-205ENST00000596161 PTCD2Q8WV60 388 aaKnown RBP19.87■□□□□ 0.77
CCDC61-205ENST00000596161 TRIM51Q9BSJ1 452 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 LRRC61Q9BV99 259 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 RMI1Q9H9A7 625 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 CARS2Q9HA77 564 aaKnown RBP19.87■□□□□ 0.77
CCDC61-205ENST00000596161 TRIM39Q9HCM9 518 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 SMOXQ9NWM0 555 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 DLL3Q9NYJ7 618 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 PNMA8BQ9ULN7 279 aaPredicted RBP19.87■□□□□ 0.77
CCDC61-205ENST00000596161 TMEM98Q9Y2Y6 226 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 MRFAP1Q9Y605 127 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 WDR87Q6ZQQ6 2873 aa19.87■□□□□ 0.77
CCDC61-205ENST00000596161 GPR89AB7ZAQ6 455 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 GAPDHSO14556 408 aaPredicted RBP19.86■□□□□ 0.77
CCDC61-205ENST00000596161 VEGFDO43915 354 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 SH3BP5O60239 455 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 GPR89BP0CG08 455 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 MGAT1P26572 445 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 XIAPP98170 497 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 PUM1Q14671 1186 aaKnown RBP eCLIP19.86■□□□□ 0.77
CCDC61-205ENST00000596161 LDLRAP1Q5SW96 308 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 RHBDD1Q8TEB9 315 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 ULK4Q96C45 1275 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 SCARF2Q96GP6 870 aaPredicted RBP19.86■□□□□ 0.77
CCDC61-205ENST00000596161 CDKN2AIPNLQ96HQ2 116 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 ZCCHC2Q9C0B9 1178 aaKnown RBP19.86■□□□□ 0.77
CCDC61-205ENST00000596161 TCEAL2Q9H3H9 227 aaPredicted RBP19.86■□□□□ 0.77
CCDC61-205ENST00000596161 ASB8Q9H765 288 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 MRPL40Q9NQ50 206 aaKnown RBP19.86■□□□□ 0.77
CCDC61-205ENST00000596161 SUFUQ9UMX1 484 aa19.86■□□□□ 0.77
CCDC61-205ENST00000596161 OAS3Q9Y6K5 1087 aaKnown RBP19.86■□□□□ 0.77
CCDC61-205ENST00000596161 EFCAB8A8MWE9 144 aa19.85■□□□□ 0.77
CCDC61-205ENST00000596161 SCAMP1O15126 338 aa19.85■□□□□ 0.77
CCDC61-205ENST00000596161 UGT1A9O60656 530 aa19.85■□□□□ 0.77
CCDC61-205ENST00000596161 UGT1A6P19224 532 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms