RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 OR13F1Q8NGS4 319 aa17.31■□□□□ 0.36
ARHGEF1-213ENST00000595897 BIRC7Q96CA5 298 aa17.31■□□□□ 0.36
ARHGEF1-213ENST00000595897 WARS2Q9UGM6 360 aaKnown RBP17.31■□□□□ 0.36
ARHGEF1-213ENST00000595897 KPNA6O60684 536 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 KCNH1O95259 989 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 PAPSS2O95340 614 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 ESRRBO95718 433 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 GLP2RO95838 553 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 FUCA1P04066 466 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 AFF1P51825 1210 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 TMBIM6P55061 237 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 YWHAHQ04917 246 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 CLCQ05315 142 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 BRMS1LQ5PSV4 323 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 MARC1Q5VT66 337 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 BROXQ5VW32 411 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 SCIMPQ6UWF3 145 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 RTL3Q8N8U3 475 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 GLT1D1Q96MS3 346 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 GAD1Q99259 594 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 BEGAINQ9BUH8 593 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 KATNBL1Q9H079 304 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 KCNH4Q9UQ05 1017 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 GPR45Q9Y5Y3 372 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 A0A1B0GTL3 188 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 E9PAM4 449 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 TREHO43280 583 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 MBL2P11226 248 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 TPD52P55327 224 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 ADARB1P78563 741 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 SLC10A7Q0GE19 358 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 LCP2Q13094 533 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 SPATS1Q496A3 300 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 PAN2Q504Q3 1202 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 USP51Q70EK9 711 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 PTRH1Q86Y79 214 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 C3orf58Q8NDZ4 430 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 IMP4Q96G21 291 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 NSMCE2Q96MF7 247 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 TRNAU1APQ9NX07 287 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 PCDHGA4Q9Y5G9 962 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 CORINQ9Y5Q5 1042 aa17.3■□□□□ 0.36
ARHGEF1-213ENST00000595897 VPS4BO75351 444 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 PCNAP12004 261 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 MTHFD2P13995 350 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 ZNF37AP17032 561 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 UFM1P61960 85 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 GRSF1Q12849 480 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■□□□□ 8.3
ARHGEF1-213ENST00000595897 RCAN2Q14206 197 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 PYCR3Q53H96 274 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 KIAA2013Q8IYS2 634 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 LEMD2Q8NC56 503 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 BLOC1S5Q8TDH9 187 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 ZC3H15Q8WU90 426 aaKnown RBP17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 TRIM62Q9BVG3 475 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 UXTQ9UBK9 157 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 GNPTGQ9UJJ9 305 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 LEF1Q9UJU2 399 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 RNF112Q9ULX5 631 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 J3KR12 359 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 COQ9O75208 318 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 SLC22A3O75751 556 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 RSL1D1O76021 490 aaKnown RBP17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 WISP3O95389 354 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 FDXRP22570 491 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 SPIDRQ14159 915 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 PTPRCAPQ14761 206 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 EGFLAMQ63HQ2 1017 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 ZNF549Q6P9A3 640 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 GALNT7Q86SF2 657 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 C14orf80Q86SX3 495 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 STK32CQ86UX6 486 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 GPC2Q8N158 579 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 FBXO39Q8N4B4 442 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 NANOGQ9H9S0 305 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 CSNK1G1Q9HCP0 422 aa17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 INTS7Q9NVH2 962 aaKnown RBP17.29■□□□□ 0.36
ARHGEF1-213ENST00000595897 DYTNA2CJ06 578 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 NCF1BA6NI72 391 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 NCF1CA8MVU1 366 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 H0YAE9 185 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 CPNE6O95741 557 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 CHEK2O96017 543 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 THP07101 528 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 NCF1P14598 390 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 CDH3P22223 829 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 MRNIPQ6NTE8 343 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 ITIH5Q86UX2 942 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 RALGPS2Q86X27 583 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 RAB2BQ8WUD1 216 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 CASP10Q92851 521 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 AGO3Q9H9G7 860 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 SP110Q9HB58 689 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 PSME2Q9UL46 239 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 SLC30A1Q9Y6M5 507 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 UBA6A0AVT1 1052 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 TYW5A2RUC4 315 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 MBLAC1A4D2B0 266 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 TMEM221A6NGB7 291 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms