RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 CDH19Q9H159 772 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 GBA3Q9H227 469 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 FAM83DQ9H4H8 585 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 RSPH14Q9UHP6 348 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 TRHDEQ9UKU6 1024 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 PACSIN2Q9UNF0 486 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-205ENST00000595028 SHOC2Q9UQ13 582 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 PCDHB1Q9Y5F3 818 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 SPO11Q9Y5K1 396 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 SPTA1P02549 2419 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 LOC285095A0A1B0GVY8 99 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 DDX3YO15523 660 aaKnown RBP15□□□□□ -0.01
TRIM28-205ENST00000595028 CSO75390 466 aaKnown RBP15□□□□□ -0.01
TRIM28-205ENST00000595028 TCEA3O75764 348 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 TJP3O95049 919 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 EPOP01588 193 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 RBP3P10745 1247 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 EIF3EP60228 445 aaKnown RBP15□□□□□ -0.01
TRIM28-205ENST00000595028 MPP3Q13368 585 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 RTP5Q14D33 572 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 KIF26BQ2KJY2 2108 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 CERCAMQ5T4B2 595 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 ITPRIPL1Q6GPH6 555 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 OGFOD3Q6PK18 319 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 RBM44Q6ZP01 1051 aaKnown RBP15□□□□□ -0.01
TRIM28-205ENST00000595028 PID1Q7Z2X4 250 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 SFTPA2Q8IWL1 248 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 OR6C4Q8NGE1 309 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 WDR48Q8TAF3 677 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 MRGPRX2Q96LB1 330 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 SRPK1Q96SB4 655 aaKnown RBP15□□□□□ -0.01
TRIM28-205ENST00000595028 FAM118BQ9BPY3 351 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 FERMT1Q9BQL6 677 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 GPR63Q9BZJ6 419 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 TSGA10Q9BZW7 698 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 C10orf88Q9H8K7 445 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 RAD18Q9NS91 495 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 VPS18Q9P253 973 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 CNOT6Q9ULM6 557 aaKnown RBP15□□□□□ -0.01
TRIM28-205ENST00000595028 TMEM98Q9Y2Y6 226 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 ADGRG1Q9Y653 693 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 PTPRQQ9UMZ3 2332 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 UNC13CQ8NB66 2214 aa15□□□□□ -0.01
TRIM28-205ENST00000595028 ZNF106Q9H2Y7 1883 aaKnown RBP14.99□□□□□ -0.01
TRIM28-205ENST00000595028 ARHGAP6O43182 974 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 AK4P27144 223 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-205ENST00000595028 ADCY8P40145 1251 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 TNNT3P45378 269 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-205ENST00000595028 CTBSQ01459 385 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 ISXQ2M1V0 245 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 C14orf28Q4W4Y0 310 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 ZNF569Q5MCW4 686 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 ALS2CLQ60I27 953 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 TMC3Q7Z5M5 1100 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 GALNT13Q8IUC8 556 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 RNF10Q8N5U6 811 aaKnown RBP14.99□□□□□ -0.01
TRIM28-205ENST00000595028 GPR26Q8NDV2 337 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 CCDC112Q8NEF3 446 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 IPMKQ8NFU5 416 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 HES6Q96HZ4 224 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 GORASP1Q9BQQ3 440 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 ZSCAN5AQ9BUG6 496 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 DPEP2Q9H4A9 486 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 SYNDIG1Q9H7V2 258 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 SPATS2LQ9NUQ6 558 aaKnown RBP14.99□□□□□ -0.01
TRIM28-205ENST00000595028 TAAR2Q9P1P5 351 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 RABGEF1Q9UJ41 708 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 ST14Q9Y5Y6 855 aa14.99□□□□□ -0.01
TRIM28-205ENST00000595028 OAS3Q9Y6K5 1087 aaKnown RBP14.99□□□□□ -0.01
TRIM28-205ENST00000595028 GOLGA6L9A6NEM1 432 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 J3QKU1 62 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 NTN3O00634 580 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 AURKAO14965 403 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 CASC3O15234 703 aaKnown RBP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 KCNN4O15554 427 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 ZNF189O75820 626 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 STK10O94804 968 aaKnown RBP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 ASMTLO95671 621 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 ATP1A1P05023 1023 aaKnown RBP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 FGF1P05230 155 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 HLA-DPA1P20036 260 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 ITPKBP27987 946 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 ACTR1BP42025 376 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 CHRNA4P43681 627 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 PDX1P52945 283 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 ACTR1AP61163 376 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 KLF1Q13351 362 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 LRP8Q14114 963 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 SPIDRQ14159 915 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 HLTFQ14527 1009 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 PYCR3Q53H96 274 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 SIRPB2Q5JXA9 342 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 PDPK2PQ6A1A2 396 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 DARS2Q6PI48 645 aaKnown RBP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 SLC30A9Q6PML9 568 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 MARK2Q7KZI7 788 aaKnown RBP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 SLC25A41Q8N5S1 370 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 TRAM1L1Q8N609 369 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 LSM14AQ8ND56 463 aaKnown RBP14.98□□□□□ -0.01
TRIM28-205ENST00000595028 SPATA13Q96N96 652 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms