RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 THRAP10827 490 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 PLA2G2AP14555 144 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 ETV5P41161 510 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 CD86P42081 329 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 MAPK10P53779 464 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 DCDC1P59894 354 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 MESDQ14696 234 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 PDK1Q15118 436 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
APOC1-209ENST00000592885 MANEAQ5SRI9 462 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.17□□□□□ -0.3
APOC1-209ENST00000592885 PDPK2PQ6A1A2 396 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 ZNF574Q6ZN55 896 aaPredicted RBP13.17□□□□□ -0.3
APOC1-209ENST00000592885 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
APOC1-209ENST00000592885 TRIM74Q86UV6 250 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 SFRP1Q8N474 314 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 ZSCAN1Q8NBB4 408 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 AGBL5Q8NDL9 886 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 SLC35G2Q8TBE7 412 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 SLC37A2Q8TED4 501 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 PATE1Q8WXA2 126 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 RAPGEF5Q92565 580 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 USP7Q93009 1102 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 SH3KBP1Q96B97 665 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 SGF29Q96ES7 293 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 SMIM14Q96QK8 99 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 TAAR9Q96RI9 348 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 WDR24Q96S15 920 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 SRPK1Q96SB4 655 aaKnown RBP13.17□□□□□ -0.3
APOC1-209ENST00000592885 AGAP2Q99490 1192 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 DDA1Q9BW61 102 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 EPB41L1Q9H4G0 881 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 FAM83DQ9H4H8 585 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 SARS2Q9NP81 518 aaKnown RBP13.17□□□□□ -0.3
APOC1-209ENST00000592885 ABHD10Q9NUJ1 306 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 FOXJ2Q9P0K8 574 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 HELZ2Q9BYK8 2649 aaKnown RBP13.17□□□□□ -0.3
APOC1-209ENST00000592885 C3orf70A6NLC5 250 aaPredicted RBP13.16□□□□□ -0.3
APOC1-209ENST00000592885 STMND1H3BQB6 276 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 KCNK1O00180 336 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 INPP4BO15327 924 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 EFSO43281 561 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 MFAP3LO75121 409 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 JCHAINP01591 159 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 CSF2RBP32927 897 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 SLC1A1P43005 524 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 ATP1A2P50993 1020 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 EPHA4P54764 986 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 RAB15P59190 212 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 ZBTB17Q13105 803 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 TCEAL1Q15170 157 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 KIAA1614Q5VZ46 1190 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 TMEM71Q6P5X7 295 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 USP53Q70EK8 1073 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 VSTM4Q8IW00 320 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.16□□□□□ -0.3
APOC1-209ENST00000592885 CNTD1Q8N815 330 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 OR10G6Q8NH81 332 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 IMP4Q96G21 291 aaKnown RBP13.16□□□□□ -0.3
APOC1-209ENST00000592885 CCDC42Q96M95 316 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 OLFM3Q96PB7 478 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 TRIB3Q96RU7 358 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 SLC38A3Q99624 504 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 ZSCAN5AQ9BUG6 496 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 MAK16Q9BXY0 300 aaKnown RBP13.16□□□□□ -0.3
APOC1-209ENST00000592885 CARD9Q9H257 536 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 ZFYVE1Q9HBF4 777 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 MAGEE1Q9HCI5 957 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 DDX56Q9NY93 547 aaKnown RBP13.16□□□□□ -0.3
APOC1-209ENST00000592885 PDP2Q9P2J9 529 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 INTUQ9ULD6 942 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 CNOT6Q9ULM6 557 aaKnown RBP13.16□□□□□ -0.3
APOC1-209ENST00000592885 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 CFAP46Q8IYW2 2715 aa13.16□□□□□ -0.3
APOC1-209ENST00000592885 KIR2DS5A0A0G2JLQ3 304 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 A0A0G2JNG1 304 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 A6NCN8 305 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 OR5K4A6NMS3 321 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 FADS2P1A8MWK0 482 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 B4E171 279 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 KIR2DS3K7RE56 304 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 KRT1P04264 644 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 CSTF2P33240 577 aaKnown RBP eCLIP13.15□□□□□ -0.3
APOC1-209ENST00000592885 TSPAN7P41732 249 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 CLCNKAP51800 687 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 HHEXQ03014 270 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 AP1B1Q10567 949 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 LY6DQ14210 128 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 KIR2DS5Q14953 304 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 TGIF1Q15583 401 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 ODF2Q5BJF6 829 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 WDR74Q6RFH5 385 aaPredicted RBP13.15□□□□□ -0.3
APOC1-209ENST00000592885 BZW1Q7L1Q6 419 aaKnown RBP13.15□□□□□ -0.3
APOC1-209ENST00000592885 CHST15Q7LFX5 561 aaPredicted RBP13.15□□□□□ -0.3
APOC1-209ENST00000592885 LYSMD3Q7Z3D4 306 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 SLC9B2Q86UD5 537 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 NT5DC3Q86UY8 548 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 ZFAND4Q86XD8 727 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 PHYKPLQ8IUZ5 450 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms