RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 KIAA1143Q96AT1 154 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-238ENST00000592412 HAUS4Q9H6D7 363 aa18.12■□□□□ 0.49
CIRBP-238ENST00000592412 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.12■□□□□ 0.49
CIRBP-238ENST00000592412 LMBRD1Q9NUN5 540 aa18.12■□□□□ 0.49
CIRBP-238ENST00000592412 LRRC53A6NM62 1247 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 PRLP01236 227 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 CCDC172P0C7W6 258 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 RARAP10276 462 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 ZNF30P17039 623 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 NR1D1P20393 614 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 ARL4AP40617 200 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 STAT5AP42229 794 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 ALG1LQ6GMV1 187 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 CHST15Q7LFX5 561 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-238ENST00000592412 BBS5Q8N3I7 341 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 MIB2Q96AX9 1013 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 ZNF653Q96CK0 615 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 RNF31Q96EP0 1072 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 PSMG3-AS1Q96PY0 264 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 ZPBPQ9BS86 351 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 TBC1D10AQ9BXI6 508 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 PCDH18Q9HCL0 1135 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 VPS18Q9P253 973 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 KLHL3Q9UH77 587 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 ZNHIT2Q9UHR6 403 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 MYO6Q9UM54 1294 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 KCNK6Q9Y257 313 aa18.11■□□□□ 0.49
CIRBP-238ENST00000592412 SPTBN1Q01082 2364 aaKnown RBP18.11■□□□□ 0.49
CIRBP-238ENST00000592412 MN1Q10571 1320 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-238ENST00000592412 FADS2P1A8MWK0 482 aa18.1■□□□□ 0.49
CIRBP-238ENST00000592412 CLDN7O95471 211 aa18.1■□□□□ 0.49
CIRBP-238ENST00000592412 ASMTLO95671 621 aa18.1■□□□□ 0.49
CIRBP-238ENST00000592412 GZMAP12544 262 aa18.1■□□□□ 0.49
CIRBP-238ENST00000592412 ZNF28P17035 718 aa18.1■□□□□ 0.49
CIRBP-238ENST00000592412 IL4RP24394 825 aa18.1■□□□□ 0.49
CIRBP-238ENST00000592412 CRTC2Q53ET0 693 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-238ENST00000592412 ANKRD20A12PQ8NF67 263 aa18.1■□□□□ 0.49
CIRBP-238ENST00000592412 EFHD1Q9BUP0 239 aa18.1■□□□□ 0.49
CIRBP-238ENST00000592412 TDRD1Q9BXT4 1180 aaKnown RBP18.1■□□□□ 0.49
CIRBP-238ENST00000592412 OGFRQ9NZT2 677 aa18.1■□□□□ 0.49
CIRBP-238ENST00000592412 CENPEQ02224 2701 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 PRR19A6NJB7 356 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 PYGLP06737 847 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 FURINP09958 794 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 PPM1FP49593 454 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-238ENST00000592412 EPHA4P54764 986 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 GFERP55789 205 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 DSC2Q02487 901 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 SLC25A11Q02978 314 aaKnown RBP18.09■□□□□ 0.49
CIRBP-238ENST00000592412 LACTB2Q53H82 288 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-238ENST00000592412 BOLA3Q53S33 107 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 HENMT1Q5T8I9 393 aaKnown RBP18.09■□□□□ 0.49
CIRBP-238ENST00000592412 C16orf46Q6P387 395 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 NSMCE1Q8WV22 266 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 MYO1AQ9UBC5 1043 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 CHKBQ9Y259 395 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 TP53TG5Q9Y2B4 290 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 KCNMB2Q9Y691 235 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 SCINQ9Y6U3 715 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 MYO9AB2RTY4 2548 aa18.09■□□□□ 0.49
CIRBP-238ENST00000592412 POLR1CO15160 346 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-238ENST00000592412 MFSD11O43934 449 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 NTRK1P04629 796 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 CD48P09326 243 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 ANKRD34CP0C6C1 535 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 ACP5P13686 325 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 F3P13726 295 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 TCN2P20062 427 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 PRKCIP41743 596 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 MAPK9P45984 424 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 CD97P48960 835 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 UBE2IP63279 158 aaKnown RBP18.08■□□□□ 0.48
CIRBP-238ENST00000592412 MMRN1Q13201 1228 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 MAP7Q14244 749 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 LYSMD3Q7Z3D4 306 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 KDELC2Q7Z4H8 507 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 FAM26EQ8N5C1 309 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.08■□□□□ 0.48
CIRBP-238ENST00000592412 ARRDC2Q8TBH0 407 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 MAML1Q92585 1016 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 LYSMD1Q96S90 227 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 HERPUD2Q9BSE4 406 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 POLR1EQ9GZS1 481 aaKnown RBP18.08■□□□□ 0.48
CIRBP-238ENST00000592412 TRIT1Q9H3H1 467 aaKnown RBP18.08■□□□□ 0.48
CIRBP-238ENST00000592412 AIPL1Q9NZN9 384 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 ADGRG1Q9Y653 693 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 RPS6KL1Q9Y6S9 549 aa18.08■□□□□ 0.48
CIRBP-238ENST00000592412 ZNF106Q9H2Y7 1883 aaKnown RBP18.07■□□□□ 0.48
CIRBP-238ENST00000592412 LILRA5A6NI73 299 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 MTSS1O43312 755 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 SNX2O60749 519 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 C9P02748 559 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 CDK11BP21127 795 aaKnown RBP18.07■□□□□ 0.48
CIRBP-238ENST00000592412 MAN1A1P33908 653 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 SERPINB6P35237 376 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 MC1RQ01726 317 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 ITKQ08881 620 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 NIPAL4Q0D2K0 466 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 ASIC2Q16515 512 aa18.07■□□□□ 0.48
CIRBP-238ENST00000592412 SLC9B2Q86UD5 537 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms