RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 WDR92Q96MX6 357 aa17.41■□□□□ 0.38
CIRBP-235ENST00000591935 ZNF578Q96N58 590 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-235ENST00000591935 TMEM109Q9BVC6 243 aa17.41■□□□□ 0.38
CIRBP-235ENST00000591935 RCOR3Q9P2K3 495 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-235ENST00000591935 KLQ9UEF7 1012 aa17.41■□□□□ 0.38
CIRBP-235ENST00000591935 ASIC3Q9UHC3 531 aa17.41■□□□□ 0.38
CIRBP-235ENST00000591935 ZNF487B1APH4 448 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 HTRA2O43464 458 aaPredicted RBP17.4■□□□□ 0.38
CIRBP-235ENST00000591935 USP12O75317 370 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 HOXC4P09017 264 aaPredicted RBP17.4■□□□□ 0.38
CIRBP-235ENST00000591935 MYZAPP0CAP1 466 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 ITPKBP27987 946 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 LSSP48449 732 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 CDH6P55285 790 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 SKOR1P84550 965 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 KRT81Q14533 505 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 PDK2Q15119 407 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 ISXQ2M1V0 245 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 CEP85LQ5SZL2 805 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 RBM44Q6ZP01 1051 aaKnown RBP17.4■□□□□ 0.38
CIRBP-235ENST00000591935 ATPAF2Q8N5M1 289 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 ARL10Q8N8L6 244 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 OR6C4Q8NGE1 309 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 SLC35B2Q8TB61 432 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 ATG4AQ8WYN0 398 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 ARL8AQ96BM9 186 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 ATP6V1G3Q96LB4 118 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 NUDCD1Q96RS6 583 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 POLR1BQ9H9Y6 1135 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 NOD2Q9HC29 1040 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 B4GALT6Q9UBX8 382 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 PADI4Q9UM07 663 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 DGKBQ9Y6T7 804 aa17.4■□□□□ 0.38
CIRBP-235ENST00000591935 ARHGEF17Q96PE2 2063 aaPredicted RBP17.4■□□□□ 0.38
CIRBP-235ENST00000591935 DXOO77932 396 aaKnown RBP17.39■□□□□ 0.37
CIRBP-235ENST00000591935 KRT14P02533 472 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 KRT10P13645 584 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 ADCY8P40145 1251 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 KIAA1024LP59773 190 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 ERVPABLB-1P60509 514 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 GABREP78334 506 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 TRAF2Q12933 501 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 TFDP2Q14188 446 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 OASLQ15646 514 aaKnown RBP17.39■□□□□ 0.37
CIRBP-235ENST00000591935 TTMPQ5BVD1 217 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 MARC1Q5VT66 337 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 RELL1Q8IUW5 271 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 MAP7D3Q8IWC1 876 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 KCTD6Q8NC69 237 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 PDCD6IPQ8WUM4 868 aaKnown RBP17.39■□□□□ 0.37
CIRBP-235ENST00000591935 MGME1Q9BQP7 344 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 HAUS2Q9NVX0 235 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 ANAPC5Q9UJX4 755 aa17.39■□□□□ 0.37
CIRBP-235ENST00000591935 TMEM202A6NGA9 273 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 TNFRSF10CO14798 259 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 MAP3K6O95382 1288 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 MPOP05164 745 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 CYP2A6P11509 494 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-235ENST00000591935 TRIM23P36406 574 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 MMP13P45452 471 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 ZNF844Q08AG5 666 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 DPYSL3Q14195 570 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 ACOX1Q15067 660 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 LLGL1Q15334 1064 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 KAZNQ674X7 775 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 DENND2CQ68D51 928 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 HOOK3Q86VS8 718 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 ARFGAP2Q8N6H7 521 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 ZNF248Q8NDW4 579 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 OR56A4Q8NGH8 313 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 PCDH19Q8TAB3 1148 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 OR1E3Q8WZA6 343 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 COQ10AQ96MF6 247 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 RBM15Q96T37 977 aaKnown RBP eCLIP17.38■□□□□ 0.37
CIRBP-235ENST00000591935 LGR4Q9BXB1 951 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 MRPL40Q9NQ50 206 aaKnown RBP17.38■□□□□ 0.37
CIRBP-235ENST00000591935 GULP1Q9UBP9 304 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 PHTF1Q9UMS5 762 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 BPTFQ12830 3046 aa17.38■□□□□ 0.37
CIRBP-235ENST00000591935 A0A0U1RQS6 177 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 SMAPO00193 183 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 MFSD11O43934 449 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 CPP00450 1065 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 VIPR1P32241 457 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 PCBP4P57723 403 aaKnown RBP17.37■□□□□ 0.37
CIRBP-235ENST00000591935 IHHQ14623 411 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 CNGA3Q16281 694 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 NCBP2-AS2Q69YL0 99 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 IGF2-ASQ6U949 168 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 GSTA5Q7RTV2 222 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 PCGF5Q86SE9 256 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 NDUFAF2Q8N183 169 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 CBARPQ8N350 705 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-235ENST00000591935 TEX26Q8N6G2 289 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 LRRN4Q8WUT4 740 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 PDXPQ96GD0 296 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 SMIM14Q96QK8 99 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 CCDC3Q9BQI4 270 aa17.37■□□□□ 0.37
CIRBP-235ENST00000591935 ROPN1BQ9BZX4 212 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-235ENST00000591935 WDR26Q9H7D7 661 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms