RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 DUSP3P51452 185 aaPredicted RBP18.08■□□□□ 0.48
DDX39A-212ENST00000590260 GEMP55040 296 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 SPARCL1Q14515 664 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 KCTD11Q693B1 232 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 ITPRIPL1Q6GPH6 555 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 TRAM1L1Q8N609 369 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 TTC13Q8NBP0 860 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 FAM46DQ8NEK8 389 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 MDM1Q8TC05 714 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 PATE1Q8WXA2 126 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 LIASO43766 372 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 EML2O95834 649 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 MT-CO3P00414 261 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 PYGLP06737 847 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 PDX1P52945 283 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 E2F1Q01094 437 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 HLTFQ14527 1009 aaKnown RBP eCLIP18.07■□□□□ 0.48
DDX39A-212ENST00000590260 RPS6KA1Q15418 735 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 PRUNE1Q86TP1 453 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 REXO1L1PQ8IX06 675 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 CACTIN-AS1Q8N1I8 211 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 BLOC1S5Q8TDH9 187 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 C1orf54Q8WWF1 131 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 CCDC74AQ96AQ1 378 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 RTP4Q96DX8 246 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 CCDC3Q9BQI4 270 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 SPATA16Q9BXB7 569 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 CARD9Q9H257 536 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 TAAR2Q9P1P5 351 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 VPS18Q9P253 973 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 ATXN10Q9UBB4 475 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 DOLKQ9UPQ8 538 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 KCTD3Q9Y597 815 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 PCDHB1Q9Y5F3 818 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 RP1P56715 2156 aa18.07■□□□□ 0.48
DDX39A-212ENST00000590260 ZFC3H1O60293 1989 aaKnown RBP18.06■□□□□ 0.48
DDX39A-212ENST00000590260 A0A1W2PNU3 283 aaPredicted RBP18.06■□□□□ 0.48
DDX39A-212ENST00000590260 GOLGA6L9A6NEM1 432 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 B4DGG1 531 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 ANXA9O76027 345 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 JUPP14923 745 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 MAZP56270 477 aaKnown RBP18.06■□□□□ 0.48
DDX39A-212ENST00000590260 ST3GAL2Q16842 350 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 ATP13A5Q4VNC0 1218 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 CCDC70Q6NSX1 233 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 SLC30A9Q6PML9 568 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 ADGRG6Q86SQ4 1221 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 NAGSQ8N159 534 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 GLIS1Q8NBF1 620 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 MAPK15Q8TD08 544 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 PLEKHG4BQ96PX9 1271 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 OR2M4Q96R27 311 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 TRABDQ9H4I3 376 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 IL26Q9NPH9 171 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 NCKIPSDQ9NZQ3 722 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 ZMIZ1Q9ULJ6 1067 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 CLCA2Q9UQC9 943 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 GPSM3Q9Y4H4 160 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 ARL5AQ9Y689 179 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 ARHGEF17Q96PE2 2063 aaPredicted RBP18.06■□□□□ 0.48
DDX39A-212ENST00000590260 DMXL2Q8TDJ6 3036 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 GOLGA4Q13439 2230 aaKnown RBP18.06■□□□□ 0.48
DDX39A-212ENST00000590260 IGF2RP11717 2491 aa18.06■□□□□ 0.48
DDX39A-212ENST00000590260 ZZEF1O43149 2961 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 A0A1W2PQM1 296 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 NTN3O00634 580 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-212ENST00000590260 ASMTLO95671 621 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 ZNF8P17098 575 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-212ENST00000590260 KCTD19Q17RG1 926 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-212ENST00000590260 CERCAMQ5T4B2 595 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 SEL1L2Q5TEA6 688 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 TAB3Q8N5C8 712 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-212ENST00000590260 SCG3Q8WXD2 468 aaKnown RBP18.05■□□□□ 0.48
DDX39A-212ENST00000590260 GLMNQ92990 594 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 GLYATL1Q969I3 302 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 SRPK1Q96SB4 655 aaKnown RBP18.05■□□□□ 0.48
DDX39A-212ENST00000590260 ZSCAN5AQ9BUG6 496 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 FSD1LQ9BXM9 530 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 GSDMCQ9BYG8 508 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 DPEP2Q9H4A9 486 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 ARNT2Q9HBZ2 717 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 RNF215Q9Y6U7 377 aa18.05■□□□□ 0.48
DDX39A-212ENST00000590260 TPRP12270 2363 aaKnown RBP18.05■□□□□ 0.48
DDX39A-212ENST00000590260 PRR19A6NJB7 356 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 NUAK1O60285 661 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 MTX2O75431 263 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 ETS1P14921 441 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 RPIAP49247 311 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 ILF3Q12906 894 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDX39A-212ENST00000590260 CHRNA6Q15825 494 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 PARP6Q2NL67 630 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 C14orf28Q4W4Y0 310 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 ZNF569Q5MCW4 686 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 PDPK2PQ6A1A2 396 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 GLT6D1Q7Z4J2 308 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 TRIM58Q8NG06 486 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 UBE2Q2Q8WVN8 375 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 ZCCHC14Q8WYQ9 949 aaKnown RBP18.04■□□□□ 0.48
DDX39A-212ENST00000590260 NAT6Q93015 286 aa18.04■□□□□ 0.48
DDX39A-212ENST00000590260 PDLIM2Q96JY6 352 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms