RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 AHCYL2Q96HN2 611 aaKnown RBP16.03■□□□□ 0.16
RAB3D-202ENST00000589655 CATSPER2Q96P56 530 aa16.03■□□□□ 0.16
RAB3D-202ENST00000589655 TEFMQ96QE5 360 aaKnown RBP16.03■□□□□ 0.16
RAB3D-202ENST00000589655 TDRD1Q9BXT4 1180 aaKnown RBP16.03■□□□□ 0.16
RAB3D-202ENST00000589655 GPN2Q9H9Y4 310 aaPredicted RBP16.03■□□□□ 0.16
RAB3D-202ENST00000589655 MRPL47Q9HD33 250 aaKnown RBP16.03■□□□□ 0.16
RAB3D-202ENST00000589655 FBXO8Q9NRD0 319 aa16.03■□□□□ 0.16
RAB3D-202ENST00000589655 VPS18Q9P253 973 aa16.03■□□□□ 0.16
RAB3D-202ENST00000589655 ZNHIT2Q9UHR6 403 aa16.03■□□□□ 0.16
RAB3D-202ENST00000589655 KCNK6Q9Y257 313 aa16.03■□□□□ 0.16
RAB3D-202ENST00000589655 TMEM184BQ9Y519 407 aaPredicted RBP16.03■□□□□ 0.16
RAB3D-202ENST00000589655 CLEC18AA5D8T8 446 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 CAPN5O15484 640 aaPredicted RBP16.02■□□□□ 0.16
RAB3D-202ENST00000589655 ASMTLO95671 621 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 SERPINB6P35237 376 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 CASRP41180 1078 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 GARSP41250 739 aaKnown RBP16.02■□□□□ 0.16
RAB3D-202ENST00000589655 ARSEP51690 589 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 FOXK1P85037 733 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 ITKQ08881 620 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 NIPAL4Q0D2K0 466 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 GALNT2Q10471 571 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 CDC20Q12834 499 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 ATP1A1-AS1Q5TC04 95 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 CLEC18BQ6UXF7 455 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 NIPA2Q8N8Q9 360 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 CLEC18CQ8NCF0 446 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 LRRN4Q8WUT4 740 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 NCSTNQ92542 709 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 TRIM11Q96F44 468 aa16.02■□□□□ 0.16
RAB3D-202ENST00000589655 POLR1EQ9GZS1 481 aaKnown RBP16.02■□□□□ 0.16
RAB3D-202ENST00000589655 ZNF71Q9NQZ8 489 aaPredicted RBP16.02■□□□□ 0.16
RAB3D-202ENST00000589655 SIDT1Q9NXL6 827 aaKnown RBP16.02■□□□□ 0.16
RAB3D-202ENST00000589655 STK17BO94768 372 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 DLGAP3O95886 979 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 PYGLP06737 847 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 ACP5P13686 325 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 MAP4P27816 1152 aaKnown RBP16.01■□□□□ 0.15
RAB3D-202ENST00000589655 PIGHQ14442 188 aaPredicted RBP16.01■□□□□ 0.15
RAB3D-202ENST00000589655 ATP13A4Q4VNC1 1196 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 HENMT1Q5T8I9 393 aaKnown RBP16.01■□□□□ 0.15
RAB3D-202ENST00000589655 HGSNATQ68CP4 663 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 NCBP2-AS2Q69YL0 99 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 CEACAM20Q6UY09 585 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 CPNE8Q86YQ8 564 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 LRRC49Q8IUZ0 686 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 NDUFAF2Q8N183 169 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
RAB3D-202ENST00000589655 LYSMD1Q96S90 227 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 TBC1D10AQ9BXI6 508 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 ZMYND15Q9H091 742 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 THAP2Q9H0W7 228 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 ANKMY1Q9P2S6 941 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 KLHL3Q9UH77 587 aa16.01■□□□□ 0.15
RAB3D-202ENST00000589655 MATN3O15232 486 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 HLA-DQB2P05538 268 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 F3P13726 295 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 F8A1P23610 371 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 SPINT3P49223 89 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 PPM1FP49593 454 aaPredicted RBP16■□□□□ 0.15
RAB3D-202ENST00000589655 EPHB1P54762 984 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 TYRO3Q06418 890 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 ABHD18Q0P651 414 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 UBAP2LQ14157 1087 aaKnown RBP16■□□□□ 0.15
RAB3D-202ENST00000589655 PAFAH1B3Q15102 231 aaKnown RBP16■□□□□ 0.15
RAB3D-202ENST00000589655 LYSMD3Q7Z3D4 306 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 LPCAT1Q8NF37 534 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 C9orf43Q8TAL5 461 aaPredicted RBP16■□□□□ 0.15
RAB3D-202ENST00000589655 STARD8Q92502 1023 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 KIAA1143Q96AT1 154 aaPredicted RBP16■□□□□ 0.15
RAB3D-202ENST00000589655 EID2BQ96D98 161 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 RNF31Q96EP0 1072 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 ABHD17AQ96GS6 310 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 RBM22Q9NW64 420 aaKnown RBP eCLIP16■□□□□ 0.15
RAB3D-202ENST00000589655 OGFRQ9NZT2 677 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 RCOR3Q9P2K3 495 aaPredicted RBP16■□□□□ 0.15
RAB3D-202ENST00000589655 ANAPC2Q9UJX6 822 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 ADGRG1Q9Y653 693 aa16■□□□□ 0.15
RAB3D-202ENST00000589655 MRPS18BQ9Y676 258 aaKnown RBP16■□□□□ 0.15
RAB3D-202ENST00000589655 USP9YO00507 2555 aaPredicted RBP16■□□□□ 0.15
RAB3D-202ENST00000589655 USP9XQ93008 2570 aaPredicted RBP16■□□□□ 0.15
RAB3D-202ENST00000589655 MN1Q10571 1320 aaPredicted RBP15.99■□□□□ 0.15
RAB3D-202ENST00000589655 SNX2O60749 519 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 MMP2P08253 660 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 ZNF28P17035 718 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 STAT5AP42229 794 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 MAPK9P45984 424 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 EPHA4P54764 986 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 GFERP55789 205 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 UBE2IP63279 158 aaKnown RBP15.99■□□□□ 0.15
RAB3D-202ENST00000589655 DPYSL3Q14195 570 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 KRT81Q14533 505 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 QPCTQ16769 361 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 DEFB109BQ30KR1 87 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 ZNF648Q5T619 568 aaPredicted RBP15.99■□□□□ 0.15
RAB3D-202ENST00000589655 RAVER1Q8IY67 606 aaKnown RBP15.99■□□□□ 0.15
RAB3D-202ENST00000589655 FATE1Q969F0 183 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 TSGA13Q96PP4 275 aa15.99■□□□□ 0.15
RAB3D-202ENST00000589655 ZPBPQ9BS86 351 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms