RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 EID2BQ96D98 161 aa20.06■□□□□ 0.8
ATG4D-208ENST00000588667 PKNOX2Q96KN3 472 aa20.06■□□□□ 0.8
ATG4D-208ENST00000588667 ARNT2Q9HBZ2 717 aa20.06■□□□□ 0.8
ATG4D-208ENST00000588667 NINJ2Q9NZG7 142 aa20.06■□□□□ 0.8
ATG4D-208ENST00000588667 CDV3Q9UKY7 258 aaKnown RBP20.06■□□□□ 0.8
ATG4D-208ENST00000588667 SPTY2D1-AS1A0A0U1RR47 76 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 AGPSO00116 658 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 USP12O75317 370 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 TSHRP16473 764 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 TEAD1P28347 426 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 TRIM23P36406 574 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 CCT8P50990 548 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 IFFO1Q0D2I5 559 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 PTK2BQ14289 1009 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 SPARCL1Q14515 664 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 KYNUQ16719 465 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 DNAJC21Q5F1R6 531 aaKnown RBP20.05■□□□□ 0.8
ATG4D-208ENST00000588667 RFLNAQ6ZTI6 216 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 NLRP8Q86W28 1048 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 BLOC1S5Q8TDH9 187 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 AP2M1Q96CW1 435 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 C9orf72Q96LT7 481 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 APOOQ9BUR5 198 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 ABCG8Q9H221 673 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 CD84Q9UIB8 345 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 A0A1B0GTQ1 180 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 K7ESM1 405 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 YKT6O15498 198 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 ACSL3O95573 720 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 SLC4A1P02730 911 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 MLNP12872 115 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 SDHBP21912 280 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 ARRB1P49407 418 aaPredicted RBP20.05■□□□□ 0.8
ATG4D-208ENST00000588667 BBS9Q3SYG4 887 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 TPRG1LQ5T0D9 272 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 RAET1GQ6H3X3 334 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 DENND5AQ6IQ26 1287 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 MACC1Q6ZN28 852 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 GLT6D1Q7Z4J2 308 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 PARGQ86W56 976 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 PELI3Q8N2H9 469 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 PYROXD1Q8WU10 500 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 SCAMP4Q969E2 229 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 CDH19Q9H159 772 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 WDR26Q9H7D7 661 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 RAD18Q9NS91 495 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 TM7SF3Q9NS93 570 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 OGFRQ9NZT2 677 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 NFKBIL1Q9UBC1 381 aaPredicted RBP20.05■□□□□ 0.8
ATG4D-208ENST00000588667 OR1A2Q9Y585 309 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 NFS1Q9Y697 457 aa20.05■□□□□ 0.8
ATG4D-208ENST00000588667 LRP4O75096 1905 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 MYLKQ15746 1914 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 GOLGA6L10A6NI86 522 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 SLC30A4O14863 429 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 AURKAO14965 403 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 PYGLP06737 847 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 HTR1BP28222 390 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 HMGCLP35914 325 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 RXRGP48443 463 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 KIAA1024LP59773 190 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 DCDC1P59894 354 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 SLC14A1Q13336 389 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 FZD2Q14332 565 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 NFATC4Q14934 902 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 UAP1L1Q3KQV9 507 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 CROCCP2Q86T23 111 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 LINC00523Q86TU6 105 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 KRT222Q8N1A0 295 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 TTC30BQ8N4P2 665 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 LRRC39Q96DD0 335 aa20.04■□□□□ 0.8
ATG4D-208ENST00000588667 ARID1BQ8NFD5 2236 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-208ENST00000588667 CACNB4O00305 520 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-208ENST00000588667 SUN1O94901 812 aa20.03■□□□□ 0.8
ATG4D-208ENST00000588667 ABHD2P08910 425 aa20.03■□□□□ 0.8
ATG4D-208ENST00000588667 HOXC4P09017 264 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-208ENST00000588667 FASTKD3Q14CZ7 662 aaKnown RBP20.03■□□□□ 0.8
ATG4D-208ENST00000588667 RSPO4Q2I0M5 234 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-208ENST00000588667 MSS51Q4VC12 460 aa20.03■□□□□ 0.8
ATG4D-208ENST00000588667 CCDC38Q502W7 563 aa20.03■□□□□ 0.8
ATG4D-208ENST00000588667 PRAMEF14Q5SWL7 426 aa20.03■□□□□ 0.8
ATG4D-208ENST00000588667 CEP85LQ5SZL2 805 aa20.03■□□□□ 0.8
ATG4D-208ENST00000588667 HENMT1Q5T8I9 393 aaKnown RBP20.03■□□□□ 0.8
ATG4D-208ENST00000588667 CAND1Q86VP6 1230 aaKnown RBP20.03■□□□□ 0.8
ATG4D-208ENST00000588667 FUBP1Q96AE4 644 aaKnown RBP20.03■□□□□ 0.8
ATG4D-208ENST00000588667 FAM83DQ9H4H8 585 aa20.03■□□□□ 0.8
ATG4D-208ENST00000588667 PCDHGB2Q9Y5G2 931 aa20.03■□□□□ 0.8
ATG4D-208ENST00000588667 ZNF106Q9H2Y7 1883 aaKnown RBP20.03■□□□□ 0.8
ATG4D-208ENST00000588667 PCNX2A6NKB5 2137 aa20.03■□□□□ 0.8
ATG4D-208ENST00000588667 SOD1P00441 154 aa20.02■□□□□ 0.8
ATG4D-208ENST00000588667 MAGEA3P43357 314 aa20.02■□□□□ 0.8
ATG4D-208ENST00000588667 GPR1P46091 355 aa20.02■□□□□ 0.8
ATG4D-208ENST00000588667 ZNF844Q08AG5 666 aa20.02■□□□□ 0.8
ATG4D-208ENST00000588667 SHBQ15464 509 aa20.02■□□□□ 0.8
ATG4D-208ENST00000588667 HP1BP3Q5SSJ5 553 aaPredicted RBP20.02■□□□□ 0.8
ATG4D-208ENST00000588667 LRRC8BQ6P9F7 803 aa20.02■□□□□ 0.8
ATG4D-208ENST00000588667 ADAMTSL4Q6UY14 1074 aa20.02■□□□□ 0.8
ATG4D-208ENST00000588667 HEATR4Q86WZ0 1026 aa20.02■□□□□ 0.8
ATG4D-208ENST00000588667 FBXO36Q8NEA4 188 aa20.02■□□□□ 0.8
ATG4D-208ENST00000588667 OR2W6PQ8NHA6 318 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms