RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ZFR2Q9UPR6 939 aaKnown RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 CRYL1Q9Y2S2 319 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 FAM95CA0A1B0GW59 222 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 IGLON5A6NGN9 336 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 AGAP14A8MT82 685 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 FADS2P1A8MWK0 482 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 GOLGA8RI6L899 631 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 STK25O00506 426 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 TPP1O14773 563 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 OR1I1O60431 355 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 ATG13O75143 517 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 NDUFS3O75489 264 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 RFPL1O75677 317 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 PCDH8O95206 1070 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 MT-ND3P03897 115 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 ALDOAP04075 364 aaKnown RBP11.23□□□□□ -0.61
VMP1-207ENST00000588131 ACADMP11310 421 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 PMLP29590 882 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 ATP5DP30049 168 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 GMPRP36959 345 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 TPMTP51580 245 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 PGGT1BP53609 377 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 CCDC15Q0P6D6 951 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 GPR33Q49SQ1 333 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 TIFABQ6ZNK6 161 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 SH2D5Q6ZV89 423 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 USP30Q70CQ3 517 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 CYP2U1Q7Z449 544 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 CMC1Q7Z7K0 106 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 KBTBD6Q86V97 674 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 SERPINA9Q86WD7 417 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 SLC41A1Q8IVJ1 513 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 RAVER1Q8IY67 606 aaKnown RBP11.23□□□□□ -0.61
VMP1-207ENST00000588131 NRSN1Q8IZ57 195 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 C4orf33Q8N1A6 199 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 PELI3Q8N2H9 469 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 PGBD3Q8N328 593 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 TRAM1L1Q8N609 369 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 GPATCH11Q8N954 259 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 TSTD1Q8NFU3 115 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 SCG3Q8WXD2 468 aaKnown RBP11.23□□□□□ -0.61
VMP1-207ENST00000588131 AP2M1Q96CW1 435 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 NUS1Q96E22 293 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 SPATA16Q9BXB7 569 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 OSBPL6Q9BZF3 934 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 CHRDQ9H2X0 955 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 RAD18Q9NS91 495 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 INTS10Q9NVR2 710 aaKnown RBP11.23□□□□□ -0.61
VMP1-207ENST00000588131 FZD4Q9ULV1 537 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 NCKAP1Q9Y2A7 1128 aa11.23□□□□□ -0.61
VMP1-207ENST00000588131 A0A1W2PQU0 124 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 UBA6A0AVT1 1052 aaPredicted RBP11.22□□□□□ -0.61
VMP1-207ENST00000588131 PRR23AA6NEV1 266 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 K7ESM1 405 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 MAP3K13O43283 966 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 RNGTTO60942 597 aaKnown RBP11.22□□□□□ -0.61
VMP1-207ENST00000588131 SPAG7O75391 227 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 TM7SF2O76062 418 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 SOD1P00441 154 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 PDGFBP01127 241 aaPredicted RBP11.22□□□□□ -0.61
VMP1-207ENST00000588131 DCNP07585 359 aaKnown RBP11.22□□□□□ -0.61
VMP1-207ENST00000588131 PYGBP11216 843 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 SAT1P21673 171 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 ACRV1P26436 265 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 FMO4P31512 558 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 HPDP32754 393 aaPredicted RBP11.22□□□□□ -0.61
VMP1-207ENST00000588131 ACSL1P33121 698 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 CCNFP41002 786 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 MAGEA12P43365 314 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 TTPAP49638 278 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 CSRP3P50461 194 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 CLCN5P51795 746 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 PPARDQ03181 441 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 ITGA9Q13797 1035 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 FGL2Q14314 439 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 ZNF284Q2VY69 593 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 AARS2Q5JTZ9 985 aaKnown RBP11.22□□□□□ -0.61
VMP1-207ENST00000588131 CTSL3PQ5NE16 218 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 HECTD2Q5U5R9 776 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 CWF19L1Q69YN2 538 aaKnown RBP11.22□□□□□ -0.61
VMP1-207ENST00000588131 ANO7Q6IWH7 933 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 CERS6Q6ZMG9 384 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 ZNF765Q7L2R6 523 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 CEP97Q8IW35 865 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 NXPE1Q8N323 547 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 DTX3LQ8TDB6 740 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 NAT14Q8WUY8 206 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 KLK6Q92876 244 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.22□□□□□ -0.61
VMP1-207ENST00000588131 ISL2Q96A47 359 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 ELMO2Q96JJ3 720 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 PKNOX2Q96KN3 472 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 TCF12Q99081 682 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 OLFM1Q99784 485 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 AARSD1Q9BTE6 412 aaKnown RBP11.22□□□□□ -0.61
VMP1-207ENST00000588131 BOCQ9BWV1 1114 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 P2RY12Q9H244 342 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 ITM2CQ9NQX7 267 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 SNX15Q9NRS6 342 aa11.22□□□□□ -0.61
VMP1-207ENST00000588131 USP36Q9P275 1121 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms