RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CRYMQ14894 314 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 LONRF1Q17RB8 773 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 GPR33Q49SQ1 333 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 ATP13A5Q4VNC0 1218 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 FASTKD1Q53R41 847 aaKnown RBP13.53□□□□□ -0.24
VMP1-203ENST00000586245 PEAR1Q5VY43 1037 aaPredicted RBP13.53□□□□□ -0.24
VMP1-203ENST00000586245 Q6ZSR6 202 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 TAS2R42Q7RTR8 314 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 SNX20Q7Z614 316 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 DCP2Q8IU60 420 aaKnown RBP13.53□□□□□ -0.24
VMP1-203ENST00000586245 PHYKPLQ8IUZ5 450 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 IGDCC3Q8IVU1 814 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 PALM2Q8IXS6 379 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 PELI3Q8N2H9 469 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 OR13H1Q8NG92 308 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 OR4L1Q8NH43 312 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 C1orf216Q8TAB5 229 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 GDAP1Q8TB36 358 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 BTN2A2Q8WVV5 523 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.53□□□□□ -0.24
VMP1-203ENST00000586245 GLYATL1Q969I3 302 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 ULK4Q96C45 1275 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 HIC2Q96JB3 615 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 FCRL3Q96P31 734 aaPredicted RBP13.53□□□□□ -0.24
VMP1-203ENST00000586245 VPS35Q96QK1 796 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 TTC1Q99614 292 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 WDR83Q9BRX9 315 aaKnown RBP13.53□□□□□ -0.24
VMP1-203ENST00000586245 TRIM56Q9BRZ2 755 aaKnown RBP13.53□□□□□ -0.24
VMP1-203ENST00000586245 TEX101Q9BY14 249 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 SUDS3Q9H7L9 328 aaPredicted RBP13.53□□□□□ -0.24
VMP1-203ENST00000586245 UGT1A7Q9HAW7 530 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 UGT1A10Q9HAW8 530 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 UGT1A8Q9HAW9 530 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 TMEM74BQ9NUR3 256 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 OR1A2Q9Y585 309 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 SLCO1B1Q9Y6L6 691 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 FAM169AQ9Y6X4 670 aa13.53□□□□□ -0.24
VMP1-203ENST00000586245 SCN8AQ9UQD0 1980 aa13.52□□□□□ -0.24
VMP1-203ENST00000586245 ZCWPW2A0A1B0GU75 182 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 OR51F1A6NGY5 319 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 VILLO15195 856 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 SLC25A14O95258 325 aaPredicted RBP13.52□□□□□ -0.25
VMP1-203ENST00000586245 TUBBP07437 444 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 HOXC4P09017 264 aaPredicted RBP13.52□□□□□ -0.25
VMP1-203ENST00000586245 CSNK1EP49674 416 aaKnown RBP13.52□□□□□ -0.25
VMP1-203ENST00000586245 KIAA1024LP59773 190 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 CDK3Q00526 305 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.25
VMP1-203ENST00000586245 PTK2BQ14289 1009 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 SLMAPQ14BN4 828 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 DUOXA1Q1HG43 343 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
VMP1-203ENST00000586245 LYPLAL1Q5VWZ2 237 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 WDR93Q6P2C0 686 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 CCNI2Q6ZMN8 369 aaPredicted RBP13.52□□□□□ -0.25
VMP1-203ENST00000586245 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 UNC5AQ6ZN44 842 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 OTUD6BQ8N6M0 293 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 SUMF1Q8NBK3 374 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 GABPB2Q8TAK5 448 aaPredicted RBP13.52□□□□□ -0.25
VMP1-203ENST00000586245 FUBP1Q96AE4 644 aaKnown RBP13.52□□□□□ -0.25
VMP1-203ENST00000586245 SGSM3Q96HU1 749 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 ARRDC1-AS1Q9H2J1 176 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 FAM96AQ9H5X1 160 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 CATSPERZQ9NTU4 200 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 C20orf96Q9NUD7 363 aaPredicted RBP13.52□□□□□ -0.25
VMP1-203ENST00000586245 PLXNA2O75051 1894 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 WDFY4Q6ZS81 3184 aa13.52□□□□□ -0.25
VMP1-203ENST00000586245 TLR4O00206 839 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 ASMTLO95671 621 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 LMNAP02545 664 aaKnown RBP13.51□□□□□ -0.25
VMP1-203ENST00000586245 WNT1P04628 370 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 CFIP05156 583 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 RETP07949 1114 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 GSTA2P09210 222 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 MYCLP1P12525 358 aaPredicted RBP13.51□□□□□ -0.25
VMP1-203ENST00000586245 FOXN2P32314 431 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 PPARGP37231 505 aaPredicted RBP13.51□□□□□ -0.25
VMP1-203ENST00000586245 MPLP40238 635 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 VSNL1P62760 191 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 PDE1CQ14123 709 aaPredicted RBP13.51□□□□□ -0.25
VMP1-203ENST00000586245 NFATC4Q14934 902 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 LDLRAP1Q5SW96 308 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 STEAP4Q687X5 459 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 MRNIPQ6NTE8 343 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 ENPP7Q6UWV6 458 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 LAYNQ6UX15 382 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 CERS6Q6ZMG9 384 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 CAPN12Q6ZSI9 719 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 SDCCAG8Q86SQ7 713 aaPredicted RBP13.51□□□□□ -0.25
VMP1-203ENST00000586245 KCNMB4Q86W47 210 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 GSPT2Q8IYD1 628 aaKnown RBP13.51□□□□□ -0.25
VMP1-203ENST00000586245 GSDMBQ8TAX9 411 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 CALML6Q8TD86 181 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 C9orf72Q96LT7 481 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 TTC25Q96NG3 672 aa13.51□□□□□ -0.25
VMP1-203ENST00000586245 ZCCHC2Q9C0B9 1178 aaKnown RBP13.51□□□□□ -0.25
VMP1-203ENST00000586245 PPANQ9NQ55 473 aaKnown RBP13.51□□□□□ -0.25
VMP1-203ENST00000586245 SMOXQ9NWM0 555 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms