RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SLCO3A1Q9UIG8 710 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 CROTQ9UKG9 612 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 ZNF711Q9Y462 761 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 CFAP99D6REC4 459 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 TGM5O43548 720 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 ADRA1AP35348 466 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 STC1P52823 247 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 CAPRIN1Q14444 709 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 CYTH1Q15438 398 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 CRY1Q16526 586 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 LCA5Q86VQ0 697 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 PIANPQ8IYJ0 282 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 GDPD5Q8WTR4 605 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 TWIST2Q8WVJ9 160 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 PRICKLE1Q96MT3 831 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 AARSD1Q9BTE6 412 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 ZDHHC4Q9NPG8 344 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 RIC8BQ9NVN3 520 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 ARIH1Q9Y4X5 557 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 OR4F21O95013 312 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 GM2AP17900 193 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 ARRB2P32121 409 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 CLCQ05315 142 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 TEAD2Q15562 447 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 CPSF6Q16630 551 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 RARS2Q5T160 578 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 NET1Q7Z628 596 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 MFSD6LQ8IWD5 586 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 C7orf61Q8IZ16 206 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 SLC39A11Q8N1S5 342 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 C19orf60Q96EN9 201 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 MYCBPQ99417 103 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 CCDC106Q9BWC9 280 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 MTG2Q9H4K7 406 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 TREX1Q9NSU2 369 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 PKD2L2Q9NZM6 624 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 DTNAQ9Y4J8 743 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 BACE2Q9Y5Z0 518 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 COPG1Q9Y678 874 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 GLYATL1P3A0A0U1RQE8 302 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 DRGXA6NNA5 263 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 RAD51BO15315 384 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 ECI2O75521 394 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 SEC24DO94855 1032 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 LBPP18428 481 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 MAP4P27816 1152 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 LEPRP48357 1165 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 ACOX1Q15067 660 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 VPS26BQ4G0F5 336 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 USP45Q70EL2 814 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 C12orf76Q8N812 135 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 ZNF599Q96NL3 588 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 FNIP2Q9P278 1114 aa12.38□□□□□ -0.43
SMARCA4-208ENST00000585799 GNGT2O14610 69 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 LZTS3O60299 673 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 SNRPB2P08579 225 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 CES1P23141 567 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 HALP42357 657 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 GDF5P43026 501 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 SLC7A2P52569 658 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 MED21Q13503 144 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 TECRLQ5HYJ1 363 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 BNIPLQ7Z465 357 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 RP9Q8TA86 221 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 KLHL32Q96NJ5 620 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 PANX3Q96QZ0 392 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 TDRD1Q9BXT4 1180 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 MTIF3Q9H2K0 278 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 PPM1HQ9ULR3 514 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 NDUFAF1Q9Y375 327 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 FKBP6O75344 327 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 ITGAXP20702 1163 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 CD70P32970 193 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 POLE2P56282 527 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 LMAN2Q12907 356 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 CHRNA6Q15825 494 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 KRT80Q6KB66 452 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 MIER2Q8N344 545 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 CLHC1Q8NHS4 586 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 TOP1MTQ969P6 601 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 MGAMO43451 1857 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 OR2AG2A6NM03 316 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 ATXN1LP0C7T5 689 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 NFKBIAP25963 317 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 WASP42768 502 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 DSG1Q02413 1049 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 MRPL58Q14197 206 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 SEMA3AQ14563 771 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 ZNF284Q2VY69 593 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 TIGD2Q4W5G0 525 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 ACBD5Q5T8D3 534 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 GPRIN3Q6ZVF9 776 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 GRASPQ7Z6J2 395 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 MDGA1Q8NFP4 955 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 WFDC5Q8TCV5 224 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 PTERQ96BW5 349 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 SLC45A3Q96JT2 553 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms