RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CCNHP51946 323 aaPredicted RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 HK2P52789 917 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 CCDC15Q0P6D6 951 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 BST1Q10588 318 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 MTAPQ13126 283 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 SETDB1Q15047 1291 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 EIF4HQ15056 248 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 ACAP2Q15057 778 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 SMAD1Q15797 465 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 LACTB2Q53H82 288 aaPredicted RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 SPDYAQ5MJ70 313 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 UGT3A1Q6NUS8 523 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 C16orf46Q6P387 395 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 VITQ6UXI7 678 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 ZYG11AQ6WRX3 759 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 TRPM8Q7Z2W7 1104 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 RAVER1Q8IY67 606 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 KIRREL3Q8IZU9 778 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 PLD6Q8N2A8 252 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 ZBTB44Q8NCP5 570 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 NELL1Q92832 810 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 DNASE1L2Q92874 299 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 SCYL1Q96KG9 808 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 UBXN10Q96LJ8 280 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 FAM83CQ9BQN1 747 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 AARSD1Q9BTE6 412 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 TRMT61BQ9BVS5 477 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 TNKS2Q9H2K2 1166 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 MRPL46Q9H2W6 279 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 SUDS3Q9H7L9 328 aaPredicted RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 BRD9Q9H8M2 597 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 GPAMQ9HCL2 828 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 SLCO1B3Q9NPD5 702 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 TAS2R13Q9NYV9 303 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 MARCH4Q9P2E8 410 aaPredicted RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 DEC1Q9P2X7 70 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 DKK3Q9UBP4 350 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 PLA2G4CQ9UP65 541 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 PCDHB1Q9Y5F3 818 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 PCDHGA2Q9Y5H1 932 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 C1orf232A0A0U1RR37 186 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 F8W8V4 182 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 H3BMM5 538 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 ARNTLO00327 626 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 PHGDHO43175 533 aaKnown RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 BUD23O43709 281 aaKnown RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 ESR1P03372 595 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 PRKCGP05129 697 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 FGF3P11487 239 aaPredicted RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 ZNF30P17039 623 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 ITGALP20701 1170 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 GDI1P31150 447 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 MC4RP32245 332 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 HNF1BP35680 557 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 SERPINB5P36952 375 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 ABCG1P45844 678 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 SLC1A6P48664 564 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 STK19P49842 368 aaPredicted RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 DNAJB13P59910 316 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 NAA20P61599 178 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 OCRLQ01968 901 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 PCLAFQ15004 111 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 LRRC8EQ6NSJ5 796 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 CGB2Q6NT52 195 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 GDPD4Q6W3E5 623 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 DPY19L3Q6ZPD9 716 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 C10orf107Q8IVU9 208 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 CEP97Q8IW35 865 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 WDR75Q8IWA0 830 aaKnown RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 MFSD6LQ8IWD5 586 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 ETFBKMTQ8IXQ9 262 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 YAF2Q8IY57 180 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 CPA6Q8N4T0 437 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 NAT16Q8N8M0 369 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 OR6Y1Q8NGX8 325 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 DTX3LQ8TDB6 740 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 UCMAQ8WVF2 138 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 CCT6BQ92526 530 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 RSPRY1Q96DX4 576 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 LRRC3BQ96PB8 259 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 MCCC1Q96RQ3 725 aaPredicted RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 TUBB6Q9BUF5 446 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 CDH19Q9H159 772 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 STN1Q9H668 368 aaKnown RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 ACTR5Q9H9F9 607 aaPredicted RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 TRPV5Q9NQA5 729 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 PRMT8Q9NR22 394 aaPredicted RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 OXSMQ9NWU1 459 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 ZSCAN32Q9NX65 697 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 ELOVL2Q9NXB9 296 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 KCNK4Q9NYG8 393 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 SLCO3A1Q9UIG8 710 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 FKBPLQ9UIM3 349 aa10.34□□□□□ -0.75
LIG3-203ENST00000585370 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 MRPS17Q9Y2R5 130 aaKnown RBP10.34□□□□□ -0.75
LIG3-203ENST00000585370 TPRP12270 2363 aaKnown RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 TSPAN11A1L157 253 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 RGSL1A5PLK6 1076 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms