RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 SDR42E2A6NKP2 422 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 E7ESA3 106 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 CRTAMO95727 393 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 C1SP09871 688 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 TNFRSF8P28908 595 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 HMGCLP35914 325 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 STC1P52823 247 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 CRADDP78560 199 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 SUZ12Q15022 739 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 ACOX1Q15067 660 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 CCDC38Q502W7 563 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 DNAJC21Q5F1R6 531 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 PCID2Q5JVF3 399 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 ARMC3Q5W041 872 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 NAXDQ8IW45 347 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 EIF1ADQ8N9N8 165 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 PPHLN1Q8NEY8 458 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 PHACTR1Q9C0D0 580 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 MBNL1Q9NR56 388 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 MTRF1LQ9UGC7 380 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 NFU1Q9UMS0 254 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 TCAF1Q9Y4C2 921 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 ARL5AQ9Y689 179 aa15.91■□□□□ 0.14
CSNK1D-223ENST00000584472 MROH6A6NGR9 719 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 C2orf81A6NN90 581 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 FLRT2O43155 660 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 CBFA2T3O75081 653 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 BANF1O75531 89 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 SLC4A1P02730 911 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 GM2AP17900 193 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 LPOP22079 712 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 THOP1P52888 689 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 SIM1P81133 766 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 PDE1BQ01064 536 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 LAMB3Q13751 1172 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 SEPT6Q14141 434 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 PTK2BQ14289 1009 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 NAA30Q147X3 362 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 ST3GAL2Q16842 350 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 INAVAQ3KP66 663 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 BBS9Q3SYG4 887 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 CENPUQ71F23 418 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 HSD11B1LQ7Z5J1 315 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 NUS1Q96E22 293 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 DTD2Q96FN9 168 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 FMO2Q99518 471 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 MRM3Q9HC36 420 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 IL17CQ9P0M4 197 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 SOX13Q9UN79 622 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 KCTD3Q9Y597 815 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 TEX264Q9Y6I9 313 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 BPTFQ12830 3046 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 ASPMQ8IZT6 3477 aa15.9■□□□□ 0.14
CSNK1D-223ENST00000584472 MAGEB16A2A368 324 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 EIF3HO15372 352 aaKnown RBP eCLIP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 BUD23O43709 281 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 PROS1P07225 676 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 EPHA8P29322 1005 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 ZNF140P52738 457 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 PDIA2Q13087 525 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 PDE1CQ14123 709 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 FZD2Q14332 565 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 INPP5AQ14642 412 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 PTPRCAPQ14761 206 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 SHBQ15464 509 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 TRIP6Q15654 476 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 ESRP1Q6NXG1 681 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 WDR93Q6P2C0 686 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 CASC4Q6P4E1 433 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 MACC1Q6ZN28 852 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 TECPR1Q7Z6L1 1165 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 PARGQ86W56 976 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 KDF1Q8NAX2 398 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 BAHD1Q8TBE0 780 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 STYXQ8WUJ0 223 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 LRRC39Q96DD0 335 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 C19orf43Q9BQ61 176 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 WDR83Q9BRX9 315 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 KIFC1Q9BW19 673 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 TMEM121BQ9BXQ6 578 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 CHRAC1Q9NRG0 131 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 PCOLCE2Q9UKZ9 415 aa15.89■□□□□ 0.13
CSNK1D-223ENST00000584472 RGSL1A5PLK6 1076 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 STX7O15400 261 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 SH3BP5O60239 455 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 HOXC4P09017 264 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 MYBL2P10244 700 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 NME1P15531 152 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 PSMA3P25788 255 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 TEAD1P28347 426 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 TRIM23P36406 574 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 ETV3P41162 512 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 ELK3P41970 407 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 GRK6P43250 576 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 SPINT3P49223 89 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 VSNL1P62760 191 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 DPTQ07507 201 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 FOXC1Q12948 553 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 FASTKD3Q14CZ7 662 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms