RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 WASH4PA8MWX3 477 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 RASSF9O75901 435 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TMEM63AO94886 807 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 HEXIM1O94992 359 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PRKCSHP14314 528 aaPredicted RBP8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 AMD1P17707 334 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SDC4P31431 198 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 VIPR1P32241 457 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 GPR1P46091 355 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 POLD2P49005 469 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 RENBPP51606 427 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 AP1S1P61966 158 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ATP11AP98196 1134 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 RFTN1Q14699 578 aaPredicted RBP8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TRIM65Q6PJ69 517 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 DOK6Q6PKX4 331 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ADAMTSL4Q6UY14 1074 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SPNS3Q6ZMD2 512 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 STRADAQ7RTN6 431 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PRSS42Q7Z5A4 293 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TRIM59Q8IWR1 403 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 UMODL1-AS1Q8N2C9 162 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PELI3Q8N2H9 469 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CISD2Q8N5K1 135 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FDCSPQ8NFU4 85 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 NTAN1Q96AB6 310 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 C19orf60Q96EN9 201 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CINPQ9BW66 212 aaPredicted RBP8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ILKAPQ9H0C8 392 aaPredicted RBP8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 NOL6Q9H6R4 1146 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CHST11Q9NPF2 352 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LATS2Q9NRM7 1088 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CPNE7Q9UBL6 633 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 B4GALT6Q9UBX8 382 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 APEX2Q9UBZ4 518 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TMEM59LQ9UK28 342 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ITGB1BP2Q9UKP3 347 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 RARRES3Q9UL19 164 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 NEU3Q9UQ49 428 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 KLF2Q9Y5W3 355 aaPredicted RBP8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ZFHX3Q15911 3703 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 HIVEP1P15822 2718 aa8.66□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PKDREJQ9NTG1 2253 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PRRC2CQ9Y520 2896 aaKnown RBP8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 A8MX80 341 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FAM72CH0Y354 149 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 GOLGA8SH3BPF8 625 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FGF10O15520 208 aaPredicted RBP8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LRRTM2O43300 516 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PRAMEF11O60813 436 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PALMO75781 387 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 IPO13O94829 963 aaKnown RBP8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FGFR1OPO95684 399 aaKnown RBP8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LSM8O95777 96 aaKnown RBP8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 F3P13726 295 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 HTR7P34969 479 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PTGIRP43119 386 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SEPHS1P49903 392 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SH3BP2P78314 561 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 KRT85P78386 507 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ACY1Q03154 408 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ART3Q13508 389 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CNGA3Q16281 694 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PLEKHN1Q494U1 663 aaPredicted RBP8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FAM72AQ5TYM5 149 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 IZUMO3Q5VZ72 239 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FAM72DQ6L9T8 149 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 NLRP8Q86W28 1048 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FAM72BQ86X60 149 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CBARPQ8N350 705 aaPredicted RBP8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ARFGAP1Q8N6T3 406 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 NETO2Q8NC67 525 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 UBE2Q2Q8WVN8 375 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 KLHL6Q8WZ60 621 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ZDHHC12Q96GR4 267 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ELMO2Q96JJ3 720 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TGM7Q96PF1 710 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 BARD1Q99728 777 aaKnown RBP8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 NUDT9Q9BW91 350 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 KLC2Q9H0B6 622 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 RMI1Q9H9A7 625 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PDFQ9HBH1 243 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 VPS18Q9P253 973 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 COPG2Q9UBF2 871 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 HOOK1Q9UJC3 728 aaKnown RBP8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PLEKHM1Q9Y4G2 1056 aa8.65□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SPENQ96T58 3664 aaKnown RBP8.65□□□□□ -1.03
CDK5RAP3-224ENST00000582275 ADGRG4Q8IZF6 3080 aa8.65□□□□□ -1.03
CDK5RAP3-224ENST00000582275 CSMD1Q96PZ7 3565 aa8.65□□□□□ -1.03
CDK5RAP3-224ENST00000582275 SPG11Q96JI7 2443 aa8.64□□□□□ -1.03
CDK5RAP3-224ENST00000582275 ARHGAP42A6NI28 874 aa8.64□□□□□ -1.03
CDK5RAP3-224ENST00000582275 TRAFD1O14545 582 aaPredicted RBP8.64□□□□□ -1.03
CDK5RAP3-224ENST00000582275 ZNF185O15231 689 aa8.64□□□□□ -1.03
CDK5RAP3-224ENST00000582275 CPNE3O75131 537 aaKnown RBP8.64□□□□□ -1.03
CDK5RAP3-224ENST00000582275 SOCS5O75159 536 aa8.64□□□□□ -1.03
CDK5RAP3-224ENST00000582275 UBXN7O94888 489 aa8.64□□□□□ -1.03
CDK5RAP3-224ENST00000582275 ASMTLO95671 621 aa8.64□□□□□ -1.03
CDK5RAP3-224ENST00000582275 IGHEP01854 428 aa8.64□□□□□ -1.03
CDK5RAP3-224ENST00000582275 KLK3P07288 261 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms