RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PTRH2Q9Y3E5 179 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 ATXN2Q99700 1313 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 EME2A4GXA9 379 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 LINC01553A4QN01 128 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 C4orf47A7E2U8 309 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 P4HA2O15460 535 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 OGG1O15527 345 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 SLC28A2O43868 658 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 DAB1O75553 588 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 KCNK5O95279 499 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 HIST1H2ABP04908 130 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 ICAM1P05362 532 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 ACTN1P12814 892 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 HIST1H2ADP20671 130 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 UBA1P22314 1058 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 SSTR2P30874 369 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 HOXC9P31274 260 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 NNMTP40261 264 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 NRIP1P48552 1158 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 RRP1P56182 461 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 CSNK2A1P68400 391 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 MRPS5P82675 430 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 MRPS34P82930 218 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 CTF1Q16619 201 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 AMZ1Q400G9 498 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 ZNF805Q5CZA5 627 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 WDR73Q6P4I2 378 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 TMCO3Q6UWJ1 677 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 C18orf65Q6ZTR6 163 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 HIST3H2AQ7L7L0 130 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 LINC00346Q8IVM7 164 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 TMTC2Q8N394 836 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 LSMEM1Q8N8F7 131 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 CSNK2A3Q8NEV1 391 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 B4GALNT2Q8NHY0 566 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 NEUROG1Q92886 237 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 SLC22A18Q96BI1 424 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 ORAI1Q96D31 301 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 C1QTNF1Q9BXJ1 281 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 HRH4Q9H3N8 390 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 PAG1Q9NWQ8 432 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 NKIRAS2Q9NYR9 191 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 MRPL15Q9P015 296 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 SEC63Q9UGP8 760 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 CHORDC1Q9UHD1 332 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 FBXW11Q9UKB1 542 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 SNX9Q9Y5X1 595 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 EVPLQ92817 2033 aa4.68□□□□□ -1.66
SMCHD1-205ENST00000581383 OR2A25A4D2G3 310 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 M0QZ24 198 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 SOCS6O14544 535 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 PLRG1O43660 514 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 KCNJ13O60928 360 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 MITFO75030 526 aaPredicted RBP4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 HOXC6P09630 235 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 ITGB8P26012 769 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 MSH2P43246 934 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 SUOXP51687 545 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 HNRNPH2P55795 449 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 CRYZQ08257 329 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 DDR1Q08345 913 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 DSC1Q08554 894 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 HYAL1Q12794 435 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 GRSF1Q12849 480 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 DHX34Q14147 1143 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 NFATC4Q14934 902 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 PLCB4Q15147 1175 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 BMP2KLQ5H9B9 411 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 KCTD18Q6PI47 426 aaPredicted RBP4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 TSPAN33Q86UF1 283 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 KBTBD6Q86V97 674 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 HACE1Q8IYU2 909 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 SCYL3Q8IZE3 742 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 BEST3Q8N1M1 668 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 PGBD5Q8N414 524 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 IQCF1Q8N6M8 205 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 IL17RCQ8NAC3 791 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 HMGCLL1Q8TB92 370 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 HM13Q8TCT9 377 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 RHBDF1Q96CC6 855 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 LMLNQ96KR4 655 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 NUDCD1Q96RS6 583 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 CSF3RQ99062 836 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 SLF1Q9BQI6 1058 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 TEX12Q9BXU0 123 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 EPB41L5Q9HCM4 733 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 ARHGEF38Q9NXL2 777 aa4.67□□□□□ -1.66
SMCHD1-205ENST00000581383 CPED1A4D0V7 1026 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 LRRC72A6NJI9 287 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 ACOT8O14734 319 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 GLUD1P00367 558 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 MMP9P14780 707 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 GLUD2P49448 558 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 GPR143P51810 404 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 BNC1Q01954 994 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 FOXM1Q08050 763 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 TRAF3Q13114 568 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 KCNC3Q14003 757 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 PCLAFQ15004 111 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 DLG2Q15700 870 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms