RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 IL17CQ9P0M4 197 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 ARL5AQ9Y689 179 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 LAMA1P25391 3075 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 LNP1A1A4G5 178 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 K7ESM1 405 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 CACNB4O00305 520 aaPredicted RBP15.43■□□□□ 0.06
SS18-216ENST00000580751 LDB2O43679 373 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 NUDT17P0C025 328 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 BPIP17213 487 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 HTR1BP28222 390 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 PHBP35232 272 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 TRIM23P36406 574 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 SPAM1P38567 509 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 PLA2G5P39877 138 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 HADHAP40939 763 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 CTSKP43235 329 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 GPR1P46091 355 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 ZNF140P52738 457 aaPredicted RBP15.43■□□□□ 0.06
SS18-216ENST00000580751 ATXN3P54252 364 aaPredicted RBP15.43■□□□□ 0.06
SS18-216ENST00000580751 IRX4P78413 519 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 PTK2BQ14289 1009 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 KIF19Q2TAC6 998 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 BBS9Q3SYG4 887 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 HENMT1Q5T8I9 393 aaKnown RBP15.43■□□□□ 0.06
SS18-216ENST00000580751 PDPK2PQ6A1A2 396 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 TCEAL6Q6IPX3 200 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 ADAMTSL4Q6UY14 1074 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 PRR23CQ6ZRP0 262 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 NLRP9Q7RTR0 991 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 ZBED8Q8IZ13 594 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 PLA2G15Q8NCC3 412 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 GPR26Q8NDV2 337 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 PPHLN1Q8NEY8 458 aaKnown RBP15.43■□□□□ 0.06
SS18-216ENST00000580751 DTX3LQ8TDB6 740 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 TCEAL3Q969E4 200 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 CDC42EP4Q9H3Q1 356 aaKnown RBP15.43■□□□□ 0.06
SS18-216ENST00000580751 PHPT1Q9NRX4 125 aaPredicted RBP15.43■□□□□ 0.06
SS18-216ENST00000580751 RIMKLBQ9ULI2 386 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 PCDH15Q96QU1 1955 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 SCN8AQ9UQD0 1980 aa15.43■□□□□ 0.06
SS18-216ENST00000580751 MAP2K7O14733 419 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 RIPK2O43353 540 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 CER1O95813 267 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 HOXC4P09017 264 aaPredicted RBP15.42■□□□□ 0.06
SS18-216ENST00000580751 MYCLP1P12525 358 aaPredicted RBP15.42■□□□□ 0.06
SS18-216ENST00000580751 ENGP17813 658 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 TGM1P22735 817 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 KELP23276 732 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 ADRA1DP25100 572 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 HSD17B3P37058 310 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 SESN2P58004 480 aaPredicted RBP15.42■□□□□ 0.06
SS18-216ENST00000580751 KIAA1024LP59773 190 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 PDE1CQ14123 709 aaPredicted RBP15.42■□□□□ 0.06
SS18-216ENST00000580751 NFATC4Q14934 902 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 SF3A2Q15428 464 aaKnown RBP15.42■□□□□ 0.06
SS18-216ENST00000580751 MSS51Q4VC12 460 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 PCID2Q5JVF3 399 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 CERCAMQ5T4B2 595 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 LRIG3Q6UXM1 1119 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 MACC1Q6ZN28 852 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 HEATR4Q86WZ0 1026 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 PALM2Q8IXS6 379 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 IQCKQ8N0W5 287 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 SLC22A18ASQ8N1D0 253 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 OXR1Q8N573 874 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 TRAM1L1Q8N609 369 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 OR4K2Q8NGD2 314 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 STAMBPL1Q96FJ0 436 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 APOOQ9BUR5 198 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 SPATA16Q9BXB7 569 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 TEX101Q9BY14 249 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 ERVMER34-1Q9H9K5 563 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 BPIFA1Q9NP55 256 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 NINJ2Q9NZG7 142 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 SAMD15Q9P1V8 674 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 FETUBQ9UGM5 382 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 APPL1Q9UKG1 709 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 OR1A2Q9Y585 309 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 SNX11Q9Y5W9 270 aa15.42■□□□□ 0.06
SS18-216ENST00000580751 GLYATL1P3A0A0U1RQE8 302 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 SPTY2D1-AS1A0A0U1RR47 76 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 FAM237BA0A1B0GVD1 139 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 MROH6A6NGR9 719 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 BUD23O43709 281 aaKnown RBP15.41■□□□□ 0.06
SS18-216ENST00000580751 DFNA5O60443 496 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 SOD1P00441 154 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 POLBP06746 335 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 PGAM1P18669 254 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 ELK3P41970 407 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 CDK3Q00526 305 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 BNC1Q01954 994 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 AASDHQ4L235 1098 aaPredicted RBP15.41■□□□□ 0.06
SS18-216ENST00000580751 KDM7AQ6ZMT4 941 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 PARGQ86W56 976 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 PELI3Q8N2H9 469 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 FBXO36Q8NEA4 188 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 STYXQ8WUJ0 223 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 UBLCP1Q8WVY7 318 aaPredicted RBP15.41■□□□□ 0.06
SS18-216ENST00000580751 FUBP1Q96AE4 644 aaKnown RBP15.41■□□□□ 0.06
SS18-216ENST00000580751 PWWP2AQ96N64 755 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms