RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ANKRD20A1Q5TYW2 823 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ANKRD20A3Q5VUR7 823 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 KCTD16Q68DU8 428 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 HEATR6Q6AI08 1181 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 KIAA1324Q6UXG2 1013 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 RANBP10Q6VN20 620 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 GDPD4Q6W3E5 623 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 RFLNAQ6ZTI6 216 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ERN2Q76MJ5 926 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 DPPA4Q7L190 304 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ADAT2Q7Z6V5 191 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TSPAN33Q86UF1 283 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 KBTBD6Q86V97 674 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ZSCAN30Q86W11 494 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TRIM69Q86WT6 500 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CDKL3Q8IVW4 592 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CCDC117Q8IWD4 279 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TTC30BQ8N4P2 665 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 HDDC3Q8N4P3 179 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 FAM71DQ8N9W8 422 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TMEM145Q8NBT3 493 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CCDC110Q8TBZ0 833 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 HCAR2Q8TDS4 363 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ASB12Q8WXK4 309 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PRCCQ92733 491 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 DACT3Q96B18 629 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 BIRC7Q96CA5 298 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 WDR89Q96FK6 387 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 SIPA1Q96FS4 1042 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TOE1Q96GM8 510 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 C16orf45Q96MC5 204 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 COQ10AQ96MF6 247 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF641Q96N77 438 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 KLHL32Q96NJ5 620 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 AGAP3Q96P47 875 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 RBM15Q96T37 977 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 WDR83Q9BRX9 315 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CINPQ9BW66 212 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 AP1M1Q9BXS5 423 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 POLR1EQ9GZS1 481 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 RNF32Q9H0A6 362 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 DDX47Q9H0S4 455 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PCED1AQ9H1Q7 454 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 C6orf106Q9H6K1 298 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ZDHHC6Q9H6R6 413 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CAAP1Q9H8G2 361 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PLAC1Q9HBJ0 212 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ARNT2Q9HBZ2 717 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TMEM74BQ9NUR3 256 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 FAM86C1Q9NVL1 165 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 FBXL12Q9NXK8 326 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 NFKBIL1Q9UBC1 381 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PCYOX1Q9UHG3 505 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TRHDEQ9UKU6 1024 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PNMA8BQ9ULN7 279 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 HPCAL4Q9UM19 191 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 SCML1Q9UN30 329 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CYP8B1Q9UNU6 501 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 INVSQ9Y283 1065 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 RAI2Q9Y5P3 530 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 MRFAP1Q9Y605 127 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 HEATR5BQ9P2D3 2071 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CACNA1AO00555 2505 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CNOT1A5YKK6 2376 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 FER1L5A0AVI2 2057 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 MDC1Q14676 2089 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CTAGE9A4FU28 777 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CFAP69A5D8W1 941 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CAPN8A6NHC0 703 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ANKRD66B4E2M5 251 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 C1QTNF3-AMACRE9PGA6 284 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 F5H423 210 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 H7C0C1 242 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 KPNA3O00505 521 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 AURKAO14965 403 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 MTSS1O43312 755 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SYNCRIPO60506 623 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 OPHN1O60890 802 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF217O75362 1048 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 RPP40O75818 363 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ALDH1A2O94788 518 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 TMEM63AO94886 807 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 HEXIM1O94992 359 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 EPN2O95208 641 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SEMA4FO95754 770 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 AP2A1O95782 977 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CPP00450 1065 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 IL1BP01584 269 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 EPOP01588 193 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 DNTTP04053 509 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ALPIP09923 528 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SERPINA4P29622 427 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CNR2P34972 360 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 HNF1BP35680 557 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 IGFALSP35858 605 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 NNMTP40261 264 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CD86P42081 329 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms