RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CTC1Q2NKJ3 1217 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 FUT11Q495W5 492 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 DGKKQ5KSL6 1271 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 FBXW10Q5XX13 1052 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 ANKS6Q68DC2 871 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 ZNF549Q6P9A3 640 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 NAPRTQ6XQN6 538 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 ALYREFQ86V81 257 aaKnown RBP11.06□□□□□ -0.64
SKA2-204ENST00000578519 RAVER1Q8IY67 606 aaKnown RBP11.06□□□□□ -0.64
SKA2-204ENST00000578519 CLYBLQ8N0X4 340 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 FBXO39Q8N4B4 442 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 KDM1BQ8NB78 822 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 DTX3LQ8TDB6 740 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 BPIFB1Q8TDL5 484 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 OSCP1Q8WVF1 389 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 UCMAQ8WVF2 138 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 TIFAQ96CG3 184 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 SLC7A6OSQ96CW6 309 aaPredicted RBP11.06□□□□□ -0.64
SKA2-204ENST00000578519 ECHDC3Q96DC8 303 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 SGF29Q96ES7 293 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 PLEKHG4BQ96PX9 1271 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 TBC1D10AQ9BXI6 508 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 ERVK-6Q9BXR3 956 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 SMG9Q9H0W8 520 aaKnown RBP11.06□□□□□ -0.64
SKA2-204ENST00000578519 TNKS2Q9H2K2 1166 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 ZDHHC6Q9H6R6 413 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 ARL8BQ9NVJ2 186 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 GDE1Q9NZC3 331 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 BAIAP2L1Q9UHR4 511 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 PLA2G4CQ9UP65 541 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 DHRS7Q9Y394 339 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 TNPO3Q9Y5L0 923 aaKnown RBP11.06□□□□□ -0.64
SKA2-204ENST00000578519 HCFC2Q9Y5Z7 792 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 PLXNA4Q9HCM2 1894 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 KIAA1671Q9BY89 1806 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 CAPN14A8MX76 684 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 SUPT3HB4E1H0 165 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 CFAP99D6REC4 459 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 EIF3FO00303 357 aaPredicted RBP11.05□□□□□ -0.64
SKA2-204ENST00000578519 CHUKO15111 745 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 MAGEC1O60732 1142 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 SUPT3HO75486 399 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 CRCPO75575 148 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 PAPLNO95428 1278 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 PRAMEF1O95521 474 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 MLYCDO95822 493 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 CA3P07451 260 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 F7P08709 466 aaPredicted RBP11.05□□□□□ -0.64
SKA2-204ENST00000578519 CBSLP0DN79 551 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 FSHRP23945 695 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 CCND1P24385 295 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 HNRNPH1P31943 449 aaKnown RBP11.05□□□□□ -0.64
SKA2-204ENST00000578519 CBSP35520 551 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 IRS1P35568 1242 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 NSG1P42857 185 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 COPAP53621 1224 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 KCNJ2P63252 427 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 SEMA3AQ14563 771 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 DHCR24Q15392 516 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 DUSP6Q16828 381 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 ZNF678Q5SXM1 525 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 CES4AQ5XG92 561 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 NXNQ6DKJ4 435 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 PAQR3Q6TCH7 311 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 SRCAPQ6ZRS2 3230 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 FRMD7Q6ZUT3 714 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 FRA10AC1Q70Z53 315 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 ADAMTSL2Q86TH1 951 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 SERPINA9Q86WD7 417 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 GPSM1Q86YR5 675 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 MYO1HQ8N1T3 1032 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 SPATA6LQ8N4H0 392 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 TXNDC5Q8NBS9 432 aaKnown RBP11.05□□□□□ -0.64
SKA2-204ENST00000578519 ACTRT2Q8TDY3 377 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 ANKRD49Q8WVL7 239 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 PBXIP1Q96AQ6 731 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 PHF21BQ96EK2 531 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 RPL10LQ96L21 214 aaKnown RBP11.05□□□□□ -0.64
SKA2-204ENST00000578519 NSMCE3Q96MG7 304 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 GPR21Q99679 349 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 CCT7Q99832 543 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 TMEM121BQ9BXQ6 578 aaPredicted RBP11.05□□□□□ -0.64
SKA2-204ENST00000578519 ZDHHC3Q9NYG2 299 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 BCAP29Q9UHQ4 241 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 FBXO10Q9UK96 956 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 FAM50BQ9Y247 325 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 CCL26Q9Y258 94 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 SLC27A6Q9Y2P4 619 aa11.05□□□□□ -0.64
SKA2-204ENST00000578519 TRBV5-4A0A0C4DH59 114 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 ZNF195O14628 629 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 RAD51BO15315 384 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 GSC2O15499 205 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 ZBTB14O43829 449 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 BNIP3LO60238 219 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 CLDN7O95471 211 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 ATP6V1G2O95670 118 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 FGF4P08620 206 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 KRT16P08779 473 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms