RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ITM2BQ9Y287 266 aa13.35□□□□□ -0.27
SRSF1-202ENST00000578430 COMMD10Q9Y6G5 202 aa13.35□□□□□ -0.27
SRSF1-202ENST00000578430 PLK4O00444 970 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 LZTS3O60299 673 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-202ENST00000578430 IGLV3-19P01714 112 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 C6P13671 934 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 GABRG2P18507 467 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 NDUFV2P19404 249 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 GABRB3P28472 473 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 TAS2R38P59533 333 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 MAGOHP61326 146 aaKnown RBP13.34□□□□□ -0.27
SRSF1-202ENST00000578430 RPS21P63220 83 aaKnown RBP13.34□□□□□ -0.27
SRSF1-202ENST00000578430 MPP1Q00013 466 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 POU4F1Q01851 419 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 SMAD1Q15797 465 aaKnown RBP13.34□□□□□ -0.27
SRSF1-202ENST00000578430 MAP7D1Q3KQU3 841 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 HENMT1Q5T8I9 393 aaKnown RBP13.34□□□□□ -0.27
SRSF1-202ENST00000578430 MROH9Q5TGP6 573 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 KIAA1324Q6UXG2 1013 aaKnown RBP13.34□□□□□ -0.27
SRSF1-202ENST00000578430 TAS2R42Q7RTR8 314 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 CCDC91Q7Z6B0 441 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 EXOC3L1Q86VI1 746 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 PIANPQ8IYJ0 282 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 NXPE1Q8N323 547 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 SPEM1Q8N4L4 309 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 ARFGAP2Q8N6H7 521 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 HEXDCQ8WVB3 486 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 ASB12Q8WXK4 309 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 TSPAN17Q96FV3 270 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 CABS1Q96KC9 395 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 VPS35Q96QK1 796 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 SMC6Q96SB8 1091 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 WRAP53Q9BUR4 548 aaKnown RBP13.34□□□□□ -0.27
SRSF1-202ENST00000578430 FOXQ1Q9C009 403 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 ABCG8Q9H221 673 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 ITM2CQ9NQX7 267 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 FBXO6Q9NRD1 293 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-202ENST00000578430 CRLS1Q9UJA2 301 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 MTF2Q9Y483 593 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-202ENST00000578430 PCDHB1Q9Y5F3 818 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 ATG2BQ96BY7 2078 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 BPTFQ12830 3046 aa13.34□□□□□ -0.27
SRSF1-202ENST00000578430 HMX2A2RU54 273 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 GOLGA8CPA6NN73 597 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 F8W8V4 182 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 H3BMM5 538 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 STK25O00506 426 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 DCXO43602 365 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 MMP20O60882 483 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 TM7SF2O76062 418 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 RECQL5O94762 991 aaPredicted RBP13.33□□□□□ -0.28
SRSF1-202ENST00000578430 HAUS5O94927 633 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 PCDH8O95206 1070 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 ESR1P03372 595 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 MPOP05164 745 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 ZNF7P17097 686 aaPredicted RBP13.33□□□□□ -0.28
SRSF1-202ENST00000578430 ACRV1P26436 265 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 OAS2P29728 719 aaKnown RBP13.33□□□□□ -0.28
SRSF1-202ENST00000578430 ETV3P41162 512 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 ADPRHP54922 357 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 SEMA3AQ14563 771 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 KCTD16Q68DU8 428 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 FAM45BPQ6NSW5 357 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 PSAPL1Q6NUJ1 521 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 TRIM67Q6ZTA4 783 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 LCA5Q86VQ0 697 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 SERPINA9Q86WD7 417 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 SRRM1Q8IYB3 904 aaKnown RBP13.33□□□□□ -0.28
SRSF1-202ENST00000578430 RBFAQ8N0V3 343 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 DCLK2Q8N568 766 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 TSTD1Q8NFU3 115 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 OR14C36Q8NHC7 312 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 LPGAT1Q92604 370 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 AP2M1Q96CW1 435 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 ERLEC1Q96DZ1 483 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 NUS1Q96E22 293 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 SPATA16Q9BXB7 569 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 C1QTNF7Q9BXJ2 289 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 CCDC68Q9H2F9 335 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 SGK2Q9HBY8 427 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 MKS1Q9NXB0 559 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 ZDHHC3Q9NYG2 299 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 USP36Q9P275 1121 aaKnown RBP13.33□□□□□ -0.28
SRSF1-202ENST00000578430 SERGEFQ9UGK8 458 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 SMG5Q9UPR3 1016 aaKnown RBP13.33□□□□□ -0.28
SRSF1-202ENST00000578430 FNDC3AQ9Y2H6 1198 aaKnown RBP13.33□□□□□ -0.28
SRSF1-202ENST00000578430 MTO1Q9Y2Z2 717 aaKnown RBP13.33□□□□□ -0.28
SRSF1-202ENST00000578430 SIT1Q9Y3P8 196 aa13.33□□□□□ -0.28
SRSF1-202ENST00000578430 FAM95CA0A1B0GW59 222 aa13.32□□□□□ -0.28
SRSF1-202ENST00000578430 LRRC72A6NJI9 287 aa13.32□□□□□ -0.28
SRSF1-202ENST00000578430 PRMT5O14744 637 aaPredicted RBP13.32□□□□□ -0.28
SRSF1-202ENST00000578430 RFPL1O75677 317 aa13.32□□□□□ -0.28
SRSF1-202ENST00000578430 GM2AP17900 193 aa13.32□□□□□ -0.28
SRSF1-202ENST00000578430 CD9P21926 228 aa13.32□□□□□ -0.28
SRSF1-202ENST00000578430 RPS3P23396 243 aaKnown RBP eCLIP13.32□□□□□ -0.282e-6■□□□□ 8.6
SRSF1-202ENST00000578430 TEAD1P28347 426 aa13.32□□□□□ -0.28
SRSF1-202ENST00000578430 CRABP2P29373 138 aa13.32□□□□□ -0.28
SRSF1-202ENST00000578430 OXTRP30559 389 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms