RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ARHGAP10A1A4S6 786 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 C21orf140B9A014 251 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 PSMD11O00231 422 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 CCP110O43303 1012 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 HTRA2O43464 458 aaPredicted RBP16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 DPM1O60762 260 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 MT-ND3P03897 115 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 ATP1A1P05023 1023 aaKnown RBP16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 PRF1P14222 555 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 CTPS1P17812 591 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 LEPRP48357 1165 aaKnown RBP16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 RENBPP51606 427 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 RFTN1Q14699 578 aaPredicted RBP16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 NAA30Q147X3 362 aaPredicted RBP16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 CHRNA6Q15825 494 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 PAPD7Q5XG87 772 aaKnown RBP16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 DPY19L2P1Q6NXN4 242 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 FAM199XQ6PEV8 388 aaPredicted RBP16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 TECPR1Q7Z6L1 1165 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 ELOA2Q8IYF1 753 aaPredicted RBP16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 EPS8L1Q8TE68 723 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 SEC14L1Q92503 715 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 MARVELD3Q96A59 401 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 PSKH2Q96QS6 385 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 AGAP2Q99490 1192 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 AKIRIN1Q9H9L7 192 aaPredicted RBP16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 GPATCH2LQ9NWQ4 482 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 KIAA1468Q9P260 1216 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 RWDD2AQ9UIY3 292 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 PHTF1Q9UMS5 762 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 HIVEP3Q5T1R4 2406 aa16.1■□□□□ 0.17
CTDNEP1-211ENST00000575783 APCP25054 2843 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 ZFHX3Q15911 3703 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 TNRC6AQ8NDV7 1962 aaKnown RBP16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 CELSR1Q9NYQ6 3014 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 SETD2Q9BYW2 2564 aaPredicted RBP16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 SHANK1Q9Y566 2161 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 A0A1W2PQ67 120 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 DAPK3O43293 454 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 KIF1CO43896 1103 aaKnown RBP16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 CBX6O95503 412 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 C9P02748 559 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 CYP1A1P04798 512 aaPredicted RBP16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 FGF5P12034 268 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 ACP5P13686 325 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 AMD1P17707 334 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 GRNP28799 593 aaKnown RBP16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 SLC10A7Q0GE19 358 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 LBRQ14739 615 aaKnown RBP16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 KLHDC7AQ5VTJ3 777 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 SLC6A19Q695T7 634 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 PPP1R3BQ86XI6 285 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 SLC34A3Q8N130 599 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 SCRN2Q96FV2 425 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 HERPUD2Q9BSE4 406 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 OGFRQ9NZT2 677 aa16.09■□□□□ 0.17
CTDNEP1-211ENST00000575783 KIR2DS5A0A0G2JLQ3 304 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 A0A0G2JNG1 304 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 A6NL46 340 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 KIR2DS3K7RE56 304 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 EEF2KO00418 725 aaKnown RBP16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 SOCS5O75159 536 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 UBXN7O94888 489 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 TIAF1O95411 115 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 F3P13726 295 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 SLC2A4P14672 509 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 PTPN4P29074 926 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 RPS15P62841 145 aaKnown RBP16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 IL10RBQ08334 325 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 IL10RAQ13651 578 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 KIR2DS5Q14953 304 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 ZRANB3Q5FWF4 1079 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 USP45Q70EL2 814 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 ARHGAP12Q8IWW6 846 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 EXD1Q8NHP7 514 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 SPOCK2Q92563 424 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 SNRNP40Q96DI7 357 aaKnown RBP16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 NAA15Q9BXJ9 866 aaKnown RBP16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 GPR87Q9BY21 358 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 BRD8Q9H0E9 1235 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 NDST4Q9H3R1 872 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 NOD2Q9HC29 1040 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 ADAM22Q9P0K1 906 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 NOCTQ9UK39 431 aaKnown RBP16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 SLC30A1Q9Y6M5 507 aa16.08■□□□□ 0.16
CTDNEP1-211ENST00000575783 CSMD2Q7Z408 3487 aa16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 GOLGA6L3A6NEY3 463 aa16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 ANKUB1A6NFN9 424 aa16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 LILRA5A6NI73 299 aa16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 F8VZ95 297 aa16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 PES1O00541 588 aaKnown RBP16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 TOX3O15405 576 aaPredicted RBP16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 HNRNPRO43390 633 aaKnown RBP16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 DNAJC6O75061 913 aa16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 GFPT2O94808 682 aa16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 UCHL3P15374 230 aa16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 CHRNB2P17787 502 aa16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 ZNF143P52747 638 aaPredicted RBP16.07■□□□□ 0.16
CTDNEP1-211ENST00000575783 AIF1P55008 147 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms