RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PEX6Q13608 980 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 FZD2Q14332 565 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 BBS9Q3SYG4 887 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 AASDHQ4L235 1098 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-217ENST00000575711 ATP13A5Q4VNC0 1218 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 TPRG1LQ5T0D9 272 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 FNBP1LQ5T0N5 605 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 AFTPHQ6ULP2 937 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 SNX20Q7Z614 316 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 PHYKPLQ8IUZ5 450 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 OR56A4Q8NGH8 313 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 GDAP1Q8TB36 358 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 BTN2A2Q8WVV5 523 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 SEC14L1Q92503 715 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 ART4Q93070 314 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 GLYATL1Q969I3 302 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 STAMBPL1Q96FJ0 436 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 COX14Q96I36 57 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 TBATAQ96M53 351 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 ELF4Q99607 663 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-217ENST00000575711 EDEM2Q9BV94 578 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 LGR4Q9BXB1 951 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 GAREM1Q9H706 876 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 ASB8Q9H765 288 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 EPB41L5Q9HCM4 733 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 FAM114A2Q9NRY5 505 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 TREX1Q9NSU2 369 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 SMOXQ9NWM0 555 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 KLQ9UEF7 1012 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 CNOT6Q9ULM6 557 aaKnown RBP13.88□□□□□ -0.19
RPAIN-217ENST00000575711 DOCK9Q9BZ29 2069 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 FAM237BA0A1B0GVD1 139 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 TMEM202A6NGA9 273 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 DFNA5O60443 496 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 UGT1A9O60656 530 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 ASMTLO95671 621 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 PAMP19021 973 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 UGT1A6P19224 532 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 UGT1A1P22309 533 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 UGT1A4P22310 534 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 TGM1P22735 817 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 NMBRP28336 390 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 UGT1A3P35503 534 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 UGT1A5P35504 534 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 ARRB1P49407 418 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-217ENST00000575711 ARSDP51689 593 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 ACVR1Q04771 509 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 CACNG1Q06432 222 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 ZNF423Q2M1K9 1284 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 HLA-BQ31612 363 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 GPR33Q49SQ1 333 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 ZRANB3Q5FWF4 1079 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 DOK6Q6PKX4 331 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 CENPUQ71F23 418 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 TRIM74Q86UV6 250 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 LRRN4CLQ8ND94 238 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 OR6P1Q8NGX9 317 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 HDAC10Q969S8 669 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 ULK4Q96C45 1275 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 LRRC39Q96DD0 335 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 FAM122AQ96E09 287 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 MFSD3Q96ES6 412 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 SIGLEC10Q96LC7 697 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 PWWP2AQ96N64 755 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 NAT9Q9BTE0 207 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 SUDS3Q9H7L9 328 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-217ENST00000575711 UGT1A7Q9HAW7 530 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 UGT1A10Q9HAW8 530 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 UGT1A8Q9HAW9 530 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 DNAJC28Q9NX36 388 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 DMGDHQ9UI17 866 aaKnown RBP13.87□□□□□ -0.19
RPAIN-217ENST00000575711 CRLS1Q9UJA2 301 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 MOSPD1Q9UJG1 213 aa13.87□□□□□ -0.19
RPAIN-217ENST00000575711 GON4LQ3T8J9 2241 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 GPR179Q6PRD1 2367 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 CCDC162PA2VCL2 907 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 H3BM21 787 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 TNFRSF10CO14798 259 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 GPR39O43194 453 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 BANF1O75531 89 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 USP1O94782 785 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 RASGRP1O95267 797 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 GOT2P00505 430 aaKnown RBP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 POLBP06746 335 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 RHOXF2BP0C7M4 288 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 PGAM1P18669 254 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 BLKP51451 505 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 SRP54P61011 504 aaKnown RBP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 PPARDQ03181 441 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 PDIA2Q13087 525 aaKnown RBP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 EIF2B5Q13144 721 aaKnown RBP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 TRADDQ15628 312 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 ALG11Q2TAA5 492 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 ANKRD20A4Q4UJ75 823 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 MSS51Q4VC12 460 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 ZNF542PQ5EBM4 170 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 LDLRAP1Q5SW96 308 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 PRAMEF14Q5SWL7 426 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 TEX35Q5T0J7 233 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 CES3Q6UWW8 571 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms