RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 HIC2Q96JB3 615 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 PLEKHG4BQ96PX9 1271 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 VPS35Q96QK1 796 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 APOL2Q9BQE5 337 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 FICDQ9BVA6 458 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 DUSP23Q9BVJ7 150 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 ADGRE3Q9BY15 652 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 CYP4F12Q9HCS2 524 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 IL26Q9NPH9 171 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 PHPT1Q9NRX4 125 aaPredicted RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 SPATS2LQ9NUQ6 558 aaKnown RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 SMOXQ9NWM0 555 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 TRNAU1APQ9NX07 287 aaKnown RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 VPS18Q9P253 973 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 GULP1Q9UBP9 304 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 TMEM98Q9Y2Y6 226 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 KCTD3Q9Y597 815 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 PCDHB1Q9Y5F3 818 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 ARL5AQ9Y689 179 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 SDK2Q58EX2 2172 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 A0A1W2PQM1 296 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 LDB2O43679 373 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 OPA1O60313 960 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 PROS1P07225 676 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 ETS1P14921 441 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 HTR1BP28222 390 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 GPR1P46091 355 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 CTBSQ01459 385 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 PEX6Q13608 980 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 ELOCQ15369 112 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 ATP13A5Q4VNC0 1218 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 ALS2CLQ60I27 953 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 PDPK2PQ6A1A2 396 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 TTC27Q6P3X3 843 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 DRICH1Q6PGQ1 229 aaPredicted RBP8.6□□□□□ -1.03
SMG6-216ENST00000575176 ZNF534Q76KX8 674 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 PID1Q7Z2X4 250 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 ADGRG6Q86SQ4 1221 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 TXLNBQ8N3L3 684 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 SDR16C5Q8N3Y7 309 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 RASGEF1CQ8N431 466 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 SLC25A41Q8N5S1 370 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 TRAM1L1Q8N609 369 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 PRELID2Q8N945 189 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 C1orf54Q8WWF1 131 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 GLYATL1Q969I3 302 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 PRR11Q96HE9 360 aaPredicted RBP8.6□□□□□ -1.03
SMG6-216ENST00000575176 SLC13A1Q9BZW2 595 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 FAM83DQ9H4H8 585 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 CARS2Q9HA77 564 aaKnown RBP8.6□□□□□ -1.03
SMG6-216ENST00000575176 ARFGAP3Q9NP61 516 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 HAUS2Q9NVX0 235 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 PKD2L2Q9NZM6 624 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 ATXN10Q9UBB4 475 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 DKK4Q9UBT3 224 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 SLC23A2Q9UGH3 650 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 PYCARDQ9ULZ3 195 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 NEU2Q9Y3R4 380 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 BOD1L1Q8NFC6 3051 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 FAM208BQ5VWN6 2430 aa8.6□□□□□ -1.03
SMG6-216ENST00000575176 GOLGA6L3A6NEY3 463 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 NEMP2A6NFY4 417 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 GOLGA6L6A8MZA4 724 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 BUD23O43709 281 aaKnown RBP8.59□□□□□ -1.03
SMG6-216ENST00000575176 NUAK1O60285 661 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 MTX2O75431 263 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 SUN1O94901 812 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 AP2A1O95782 977 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 SLC4A1P02730 911 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 ZNF8P17098 575 aaPredicted RBP8.59□□□□□ -1.03
SMG6-216ENST00000575176 KELP23276 732 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 NFKBIAP25963 317 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 CSF2RBP32927 897 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 GRIA1P42261 906 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 GNPDA1P46926 289 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 BLKP51451 505 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 CTSCP53634 463 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 GEMP55040 296 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 MAZP56270 477 aaKnown RBP8.59□□□□□ -1.03
SMG6-216ENST00000575176 B4GALNT1Q00973 533 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 CFHR1Q03591 330 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 SEMA5AQ13591 1074 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 SPARCL1Q14515 664 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 P3H1Q32P28 736 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 ODF2Q5BJF6 829 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 ITPRIPL1Q6GPH6 555 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 DARS2Q6PI48 645 aaKnown RBP8.59□□□□□ -1.03
SMG6-216ENST00000575176 DOK6Q6PKX4 331 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 EFL1Q7Z2Z2 1120 aaKnown RBP8.59□□□□□ -1.03
SMG6-216ENST00000575176 B3GNT8Q7Z7M8 397 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 TMPRSS12Q86WS5 348 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 TTC13Q8NBP0 860 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 DDHD1Q8NEL9 900 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 TRIM58Q8NG06 486 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 OR13C4Q8NGS5 318 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 MDM1Q8TC05 714 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 UBE2Q2Q8WVN8 375 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 CCDC74AQ96AQ1 378 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 OR2M4Q96R27 311 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 C19orf43Q9BQ61 176 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms