RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ACTR1AP61163 376 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 DYNLT1P63172 113 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 C2orf54Q08AI8 447 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 PEX6Q13608 980 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 COL9A2Q14055 689 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 GLE1Q53GS7 698 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 SOWAHCQ53LP3 525 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 CERCAMQ5T4B2 595 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 ALG1LQ6GMV1 187 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 C11orf63Q6NUN7 778 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 WDR93Q6P2C0 686 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 MARK2Q7KZI7 788 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 RAB11FIP2Q7L804 512 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 HDXQ7Z353 690 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 SPRED1Q7Z699 444 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 B3GNT8Q7Z7M8 397 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 TRIM74Q86UV6 250 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 SFTPA2Q8IWL1 248 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 FBXO39Q8N4B4 442 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 MMGT1Q8N4V1 131 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 PQLC3Q8N755 202 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 UBL4BQ8N7F7 174 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 SCAMP4Q969E2 229 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 LIN37Q96GY3 246 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 SLC46A1Q96NT5 459 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 TSGA13Q96PP4 275 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 RNF157Q96PX1 679 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 SMIM14Q96QK8 99 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 OR2M4Q96R27 311 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 UBL7Q96S82 380 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 CEP41Q9BYV8 373 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 ABCG8Q9H221 673 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 ANKZF1Q9H8Y5 726 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 TAAR2Q9P1P5 351 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 ATXN7L1Q9ULK2 861 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 PPIL1Q9Y3C6 166 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 PCDHGA8Q9Y5G5 932 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 RNF215Q9Y6U7 377 aa9.62□□□□□ -0.87
NPLOC4-216ENST00000574344 ATRXP46100 2492 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 A0A1W2PNU3 283 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 A0A1W2PQM1 296 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PMS2P1A4D2B8 440 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 MIF4GDA9UHW6 222 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PLD2O14939 933 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ZW10O43264 779 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 NUDT21O43809 227 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 CLDN7O95471 211 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 IVLP07476 585 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ITGA2BP08514 1039 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 HGFP14210 728 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ZFXP17010 805 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 TEAD1P28347 426 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ADCY8P40145 1251 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 TNNT3P45378 269 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 STC1P52823 247 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 HADHBP55084 474 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 CTBSQ01459 385 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 DPTQ07507 201 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PPIDQ08752 370 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 NIPAL4Q0D2K0 466 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 SLC10A2Q12908 348 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ZBTB17Q13105 803 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 EIF3IQ13347 325 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 GALNT3Q14435 633 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 HLTFQ14527 1009 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PDK1Q15118 436 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PCSK7Q16549 785 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 AMZ1Q400G9 498 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PHF19Q5T6S3 580 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 NPNTQ6UXI9 565 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ADAMTSL4Q6UY14 1074 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 RFLNAQ6ZTI6 216 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ZNF765Q7L2R6 523 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 GPR155Q7Z3F1 870 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 TECPR1Q7Z6L1 1165 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 GALNT13Q8IUC8 556 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 RHOT1Q8IXI2 618 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PLD5Q8N7P1 536 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 NOA1Q8NC60 698 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ARRDC2Q8TBH0 407 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 CCHCR1Q8TD31 782 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 GPBAR1Q8TDU6 330 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 FATE1Q969F0 183 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 HIC2Q96JB3 615 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 MLPHQ9BV36 600 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 RIOK2Q9BVS4 552 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 TLR10Q9BXR5 811 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ADGRE3Q9BY15 652 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PRORYQ9H606 182 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 SPATS2LQ9NUQ6 558 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 TRNAU1APQ9NX07 287 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 DDX56Q9NY93 547 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PKD2L2Q9NZM6 624 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 PISDQ9UG56 409 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 APPL1Q9UKG1 709 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 TMEM98Q9Y2Y6 226 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms