RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 SOX5P35711 763 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 EPHB1P54762 984 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 PTP4A2Q12974 167 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 IL11RAQ14626 422 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 CLEC16AQ2KHT3 1053 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 PPP6R3Q5H9R7 873 aaPredicted RBP11.82□□□□□ -0.52
CTNS-208ENST00000574218 MIIPQ5JXC2 388 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 DPY19L2P1Q6NXN4 242 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 TMEM135Q86UB9 458 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 TSPAN33Q86UF1 283 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 PHF13Q86YI8 300 aaPredicted RBP11.82□□□□□ -0.52
CTNS-208ENST00000574218 PHYKPLQ8IUZ5 450 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 EXD1Q8NHP7 514 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 PRR7Q8TB68 274 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 THAP4Q8WY91 577 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 SCRN2Q96FV2 425 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 ELMO2Q96JJ3 720 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 C9orf72Q96LT7 481 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 NUDCD1Q96RS6 583 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 TBC1D10AQ9BXI6 508 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 ABCG8Q9H221 673 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 SLAMF7Q9NQ25 335 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 SIDT1Q9NXL6 827 aaKnown RBP11.82□□□□□ -0.52
CTNS-208ENST00000574218 CPNE7Q9UBL6 633 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 TBC1D29Q9UFV1 150 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 KCNK6Q9Y257 313 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 MAP4K5Q9Y4K4 846 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 PCDHGA6Q9Y5G7 932 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 CRYBG3Q68DQ2 2970 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 LILRA5A6NI73 299 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 C21orf140B9A014 251 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 DNAJB5O75953 348 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 EML2O95834 649 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 PDGFAP04085 211 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 ACP5P13686 325 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 F3P13726 295 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 DCTP40126 519 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 GFERP55789 205 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 POLR2FP61218 127 aaKnown RBP11.81□□□□□ -0.52
CTNS-208ENST00000574218 SLC10A7Q0GE19 358 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 EIF2S3LQ2VIR3 472 aaKnown RBP11.81□□□□□ -0.52
CTNS-208ENST00000574218 NADK2Q4G0N4 442 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 RALGPS1Q5JS13 557 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 PPP1R15BQ5SWA1 713 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 LRRC66Q68CR7 880 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 IYDQ6PHW0 289 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 ARHGAP36Q6ZRI8 547 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 ZNF765Q7L2R6 523 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 PPP1R3BQ86XI6 285 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 ARHGAP12Q8IWW6 846 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 CT55Q8WUE5 264 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 TGM7Q96PF1 710 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 RMI1Q9H9A7 625 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 NLRC4Q9NPP4 1024 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 VPS18Q9P253 973 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 DNPEPQ9ULA0 475 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 ZNF451Q9Y4E5 1061 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 ABCA12Q86UK0 2595 aa11.81□□□□□ -0.52
CTNS-208ENST00000574218 DOPEY1Q5JWR5 2465 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 TOX3O15405 576 aaPredicted RBP11.8□□□□□ -0.52
CTNS-208ENST00000574218 DPM1O60762 260 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 SPAG6O75602 509 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 RNF8O76064 485 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 UBXN7O94888 489 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 PGLSO95336 258 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 VIPP01282 170 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 ZNF30P17039 623 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 TYRP1P17643 537 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 PSMA2P25787 234 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 COL8A1P27658 744 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 TNFRSF8P28908 595 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 CCL11P51671 97 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 ZNF135P52742 658 aaPredicted RBP11.8□□□□□ -0.52
CTNS-208ENST00000574218 RPL7AP62424 266 aaKnown RBP11.8□□□□□ -0.52
CTNS-208ENST00000574218 RPS15P62841 145 aaKnown RBP11.8□□□□□ -0.52
CTNS-208ENST00000574218 TRAF2Q12933 501 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 INPP5JQ15735 1006 aaPredicted RBP11.8□□□□□ -0.52
CTNS-208ENST00000574218 CHRNA6Q15825 494 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 CAMK4Q16566 473 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 ERMARDQ5T6L9 678 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 TECPR1Q7Z6L1 1165 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 CBARPQ8N350 705 aaPredicted RBP11.8□□□□□ -0.52
CTNS-208ENST00000574218 SCAMP4Q969E2 229 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 MCCC1Q96RQ3 725 aaPredicted RBP11.8□□□□□ -0.52
CTNS-208ENST00000574218 TRIM55Q9BYV6 548 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 OSGEPL1Q9H4B0 414 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 ACTL8Q9H568 366 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 NOD2Q9HC29 1040 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 PDE7BQ9NP56 450 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 LHX9Q9NQ69 397 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 SRPK3Q9UPE1 567 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 PRKAB1Q9Y478 270 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 PCDHGB7Q9Y5F8 929 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 PCDHGA9Q9Y5G4 932 aaKnown RBP11.8□□□□□ -0.52
CTNS-208ENST00000574218 LRBAP50851 2863 aa11.8□□□□□ -0.52
CTNS-208ENST00000574218 CELSR2Q9HCU4 2923 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 ARGFXA6NJG6 315 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 PRPSAP2O60256 369 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms