RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 LDLRAP1Q5SW96 308 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 DOK6Q6PKX4 331 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 FAM151BQ6UXP7 276 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 ZNF548Q8NEK5 533 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 PPHLN1Q8NEY8 458 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 GDAP1Q8TB36 358 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 LMX1AQ8TE12 382 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 ZNF592Q92610 1267 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 GLMNQ92990 594 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 GLYATL1Q969I3 302 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 COX14Q96I36 57 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 TTC25Q96NG3 672 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 RANBP9Q96S59 729 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 TUBB2BQ9BVA1 445 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 FRMD8Q9BZ67 464 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 ZCCHC2Q9C0B9 1178 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 IL22Q9GZX6 179 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 RMI1Q9H9A7 625 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 CARS2Q9HA77 564 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 IL26Q9NPH9 171 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 PIH1D1Q9NWS0 290 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 FTSJ1Q9UET6 329 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 SLC17A4Q9Y2C5 497 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 COL5A1P20908 1838 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 ZFC3H1O60293 1989 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 SPTBN4Q9H254 2564 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 DCDC2BA2VCK2 349 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 FADS2P1A8MWK0 482 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 TPP1O14773 563 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 LDB2O43679 373 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 VEGFDO43915 354 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 URI1O94763 535 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 PRAMEF1O95521 474 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 CEACAM5P06731 702 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ANXA6P08133 673 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ITGALP20701 1170 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 MAGEA6P43360 314 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 GNPDA1P46926 289 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ZNF140P52738 457 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 TERF1P54274 439 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ILF3Q12906 894 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 PTK6Q13882 451 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 GTF2H3Q13889 308 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 KCNJ11Q14654 390 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ATP13A5Q4VNC0 1218 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 PCID2Q5JVF3 399 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ARMC3Q5W041 872 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 LRRC8BQ6P9F7 803 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 LVRNQ6Q4G3 990 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 MAATS1Q7Z4T9 603 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 GALNT13Q8IUC8 556 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 PPIL6Q8IXY8 311 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 RBFAQ8N0V3 343 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 EID2Q8N6I1 236 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 DEFB124Q8NES8 71 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 OR13C4Q8NGS5 318 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 OR4C6Q8NH72 309 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ZNF398Q8TD17 642 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 OR1E3Q8WZA6 343 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 PEX13Q92968 403 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ULK4Q96C45 1275 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 PDXPQ96GD0 296 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 LRRC61Q9BV99 259 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ASB8Q9H765 288 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 TRIM39Q9HCM9 518 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 XAB2Q9HCS7 855 aaKnown RBP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 FGF22Q9HCT0 170 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 MRPL40Q9NQ50 206 aaKnown RBP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 NLE1Q9NVX2 485 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 TRNAU1APQ9NX07 287 aaKnown RBP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 NCKIPSDQ9NZQ3 722 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 KLF15Q9UIH9 416 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 CDC23Q9UJX2 597 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 PCOLCE2Q9UKZ9 415 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 RIMKLBQ9ULI2 386 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 NEU2Q9Y3R4 380 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 SLC30A1Q9Y6M5 507 aa12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 GOLGA4Q13439 2230 aaKnown RBP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 ARID1BQ8NFD5 2236 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC1-206ENST00000573989 DMXL1Q9Y485 3027 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 DNAH14Q0VDD8 3507 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 MROH6A6NGR9 719 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 LMO7DNF2Z398 122 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 H7C0S8 307 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 SMAPO00193 183 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 FFAR2O15552 330 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 SRP72O76094 671 aaKnown RBP12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 KCNK5O95279 499 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 LDOC1O95751 146 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 RALBP11234 206 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 MLNP12872 115 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 KCNA4P22459 653 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 GRIA1P42261 906 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 SESN2P58004 480 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 TMPRSS15P98073 1019 aa12.65□□□□□ -0.38
TRAPPC1-206ENST00000573989 LRP8Q14114 963 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms