RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 EPHB1P54762 984 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 GBE1Q04446 702 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ARHGEF7Q14155 803 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 PTPRRQ15256 657 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ELOCQ15369 112 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 NR0B2Q15466 257 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 CNGA3Q16281 694 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 CDKN3Q16667 212 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ALG11Q2TAA5 492 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 LRRC38Q5VT99 294 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ESRP1Q6NXG1 681 aaKnown RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 LVRNQ6Q4G3 990 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 VSIG1Q86XK7 387 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 RHOT1Q8IXI2 618 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 CCDC13Q8IYE1 715 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 OR56A4Q8NGH8 313 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ARRDC2Q8TBH0 407 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 IFI44Q8TCB0 444 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 FUBP1Q96AE4 644 aaKnown RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 HDAC11Q96DB2 347 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 COQ10AQ96MF6 247 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 WDR92Q96MX6 357 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ZNF830Q96NB3 372 aaPredicted RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 LRRC61Q9BV99 259 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 BOCQ9BWV1 1114 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 LGR4Q9BXB1 951 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 NRSN2Q9GZP1 204 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 DDX56Q9NY93 547 aaKnown RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 DTLQ9NZJ0 730 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 GULP1Q9UBP9 304 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 KLQ9UEF7 1012 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 MOSPD1Q9UJG1 213 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 HYOU1Q9Y4L1 999 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 HEY1Q9Y5J3 304 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ALG6Q9Y672 507 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 U3KQA8 63 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ANKRD36A6QL64 1941 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 LRRK1Q38SD2 2015 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 A0A096LPE4 126 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 A0A0J9YYE9 177 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 A0A1W2PPZ6 126 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 TMEM202A6NGA9 273 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 NPIPB15A6NHN6 443 aaPredicted RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 M0R082 166 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 KCNK1O00180 336 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 PSMD11O00231 422 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 TNFRSF10CO14798 259 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 SPOPO43791 374 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 LCA5LO95447 670 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 TRBC1P01850 177 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 KRT1P04264 644 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 COMTP21964 271 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 CA4P22748 312 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 CYLC1P35663 651 aaPredicted RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 ETV3P41162 512 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 ZNF75DP51815 510 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 HADHBP55084 474 aaKnown RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 KIAA1024LP59773 190 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 DSC2Q02487 901 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 PPIDQ08752 370 aaKnown RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 NIPAL4Q0D2K0 466 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 AP1B1Q10567 949 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 IHHQ14623 411 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 RTP5Q14D33 572 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 PDK1Q15118 436 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 SPA17Q15506 151 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 RPS26P11Q5JNZ5 115 aaPredicted RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 CDCP2Q5VXM1 449 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 SLC9A4Q6AI14 798 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 GUSBP11Q6P575 273 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 CRTC1Q6UUV9 634 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 Q6ZVL8 140 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 USP45Q70EL2 814 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 BZW1Q7L1Q6 419 aaKnown RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 EFL1Q7Z2Z2 1120 aaKnown RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 HSD11B1LQ7Z5J1 315 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 TECPR1Q7Z6L1 1165 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 TSPAN33Q86UF1 283 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 GKN2Q86XP6 184 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 RFX6Q8HWS3 928 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 CCDC170Q8IYT3 715 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 PELI3Q8N2H9 469 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 PLD5Q8N7P1 536 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 DCBLD1Q8N8Z6 715 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 ZNF417Q8TAU3 575 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 MAPK15Q8TD08 544 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 UBXN4Q92575 508 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 NUS1Q96E22 293 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 MCCC1Q96RQ3 725 aaPredicted RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 ZNF587Q96SQ5 575 aaPredicted RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 LGMNQ99538 433 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 BHLHE41Q9C0J9 482 aaPredicted RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 WDR26Q9H7D7 661 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 PCDH9Q9HC56 1237 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 CYP4F12Q9HCS2 524 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 LUC7LQ9NQ29 371 aaKnown RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 MRPL40Q9NQ50 206 aaKnown RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 PHPT1Q9NRX4 125 aaPredicted RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 PADI4Q9UM07 663 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms